Detail



ID : Ahg493620

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|493620|fgenesh2_kg.7__3053__AT5G35590.1
Sequence
ATATACACAT CTCTGATTCA ACTCCGGCGA ATTCAGAAGA TCGAAGAAGA TGAGTAGAGG AAGCGGCGCT GGTTATGATC GTCACATCAC CATCTTCTCA CCGGAAGGTC GTCTCTTTCA AGTTGAATAT GCCTTCAAGG CCGTGAAAAC AGCTGGTATT ACTTCAATCG GAGTTCGTGG GAAAGATTCC GTTTGCGTCG TTACCCAGAA GAAAGTTCCG GACAAGCTTT TGGATCAGTC TAGTGTTACA CATCTGTTCC CGATTACCAA GTACATTGGA TTGGTAGCTA CTGGCATTAC AGCTGATGCA AGGTCTTTGG TCCAACAAGC AAGGAATCAA GCAGCTGAAT TTCGGTTCAC TTATGGATAC GAGATGCCTG TCGACATTCT TGCTAAATGG ATAGCGGACA AGTCACAGGT CTACACTCAA CATGCTTACA TGAGACCCCT TGGAGTTGGC GCTATGTTAT TTGGCGTTGA TGAAGAGAAT GGTCCCTTAC TTTACAAATG TGACCCAGCT GGACATTTTT ACGGTCACAA GGCAACGAGT GCTGGTATGA AGGAACAAGA AGCAGTCAAT TTCTTGGAAA AGAAAATGAA AGAAAACCCA GCTTTCACAT TTGATGAAAC CGTGCAGACT GCCATATCCG CTTTGCAATC TGTTCTTCAA GAAGACTTCA AGGCTACTGA GATTGAGGTA GGAGTGGTGA GAGCAGAGAA CCCAGAATTC CGTGCATTGA CAACGGAGGA GATTGAGGAG CATTTGACAG CCATTAGTGA ACGAGACTGA TCGTTTTAGT GAAACAAGTG TGAGTTACGT TAAGTGACCA CTCTCCATTA ATCTTTTGTT TGGTCTTGCT TAATTTGATT TACTTAGCAA ACCCTCCAAA CTTGAGAAAC AAAAGAAAAG CACTGTTAAG GCTGTGAAAG CATCCGTGTC TTTTGACTTT TCAGAAATGA CTTCACTCAT ATCATCACTT TCTAGCTTTT TCTTTCTATC ATAGCAGTTC TTGTGTCTTC GTCTTCACC 
Length1029
Protein Sequence
Protein Residue
Map Locationscaffold_7: 17419336.. 17421989
Download Sequence
A.thaliana
AGI-codeAT5G35590.1
Descriptionproteasome alpha subunit A1
TAIR curator summaryEncodes 20S proteasome subunit PAA1 (PAA1).
Alias[PAA1][proteasome alpha subunit A1]
Gene coexpression
MR
MR Locus Description
10.0995 Ahg936501 N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein
11.5326 Ahg314757 RNA polymerase II transcription mediators
12.49 Ahg470311 Small nuclear ribonucleoprotein family protein
19.2614 Ahg492891 aspartate kinase-homoserine dehydrogenase ii
19.8997 Ahg926872 aldehyde dehydrogenase 10A8
23.6643 Ahg931973 Secretory carrier membrane protein (SCAMP) family protein
25.923 Ahg482441 maternal effect embryo arrest 22
27.9821 Ahg494670 Lactate/malate dehydrogenase family protein
29.9333 Ahg491436 La protein 1
30.2985 Ahg486573 Calcium-dependent lipid-binding (CaLB domain) family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression