Detail



ID : Ahg493870

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|493870|fgenesh2_kg.7__3303__AT5G41070.1
Sequence
ATTTAGAACC TTTAGTACCT TACCATGTGA GTGAAGAGTT CAAAAACCTC TGCAAAAACT CTCTTTTTTT TATCTCTCTC CTCTTTAAAC TTACTTTCAA ACATTAAACA GCCAAAACCT TAGATACCAA ATTTTTACAG GGAAAAAAAA TGTATAAGAA TCAGCTTCAA GAGCTTGCAC AGAGAAGCTG TTTCAACTTA CCATCATATA CTTGCATAAG AGAAGGACCA GATCATGCTC CAAGATTCAA AGCTTCTGTT AACTTCAATG GTGAGATATT TGAAAGTCCC ACTTACTGTT CTACTCTCAG ACAAGCTGAG CATGCAGCTG CTGAAGTTTC TCTTAATGTC CTTTCCTCTA GAGTCCCTTC AAAATCCTTG ACTGCTAAGA TTCTTGATGA GACAGGGATT TACAAGAACC TGCTTCAAGA GACAGCACAC AGAGCTGGTC TTGATCTACC AATGTACACA AGTGTGAGAT CAGGATCTTG TCACTTCCCA GGTTTCTCTT GTACTGTGGA ACTTGCTGGG ATGAGTTTTA CAGGAGAATC AGCAAAGACA AAGAAACAAG CTGAGAAAAA CGCAGCCATT GCAGCTTGGT CCTCTTTGAA GAGAATGTCA AGCTTGGATT CTCAAGATGA AGAGAAGGAA CAAGAAGCAG TAGCAAGAGT ACTCTCAAGA TTTAAACCCA AAGAAGTAAG AAGAAGAGAG ACAACAAACC AATGGAGAAG AAGAACAAGT CAACAAGATT CAAACAAGGA TTTGTTGATT GAGAGATTGA GATGGATCAA CCTATTGACC AATCAAGCTT CTTCATCATC ATCATCATCA TCATCAACAC AGAATCAACA CAAAAAAACA AGTTTCATCT CTCTAATTCC CCCACCACCA CCACCTAAAT CCTCCAAAAT TTTGCCATTT ATCCAGCCAT ACAAAGACAG ATCATCACAA GAAGCTAAGA CAGAGACACC GACAGAGATG ATCATCAGCA AGGCCAAACT CAATGAAACA TCAAACAGAT TGAGTAAACA AATGCCCTTT TCCGACAATG GCAGATACAA CTTCGTCGGA GGATGTAGCG TAAACCCTTT TAGTCTGGCT CCAGCAGTTC AAATCAGATC AGTGATTCCA GTTTTCGCAG CTCCACCATC GAAACCAAAC CCTAACCTTA ACCCATCATC ATTATCATCG TCAGTCAATG AATCCACCTC ATCCATAAAC TCATGTTCTG TTCTGAATAC GCCGGTATTG GGAGGCCAAA AGAAGAAGAG TCAAAGCTGG GAAATAATCA AACTTGGTTT AGAATCGAGA ATTTCGAATC AAACCCATGA TTAGTTAGCT AAATTTGGTA AAAGGGTTAA TCTCAAATTA AATCCTTGTT AAGTGTTGTT TCCGTTTCTT GATTGTGTTC TTGTTGTTTT GAAGTTTTTG AATTTTCT 
Length1438
Protein Sequence
Protein Residue
Map Locationscaffold_7: 20514413.. 20516151
Download Sequence
A.thaliana
AGI-codeAT5G41070.1
DescriptiondsRNA-binding protein 5
TAIR curator summaryEncodes a double-stranded RNA binding protein.
Alias[DRB5][dsRNA-binding protein 5]
Gene coexpression
MR
MR Locus Description
23.3238 Ahg910459 Thioredoxin superfamily protein
28.7054 Ahg470077 Tetratricopeptide repeat (TPR)-like superfamily protein
29.2916 Ahg932008
43.2666 Ahg490643 ER lumen protein retaining receptor family protein
64.3195 Ahg342253 NAD kinase 1
65.3605 Ahg493925 20S proteasome beta subunit PBB2
74.2967 Ahg483704 TCP family transcription factor
76.8375 Ahg479725 Phototropic-responsive NPH3 family protein
82.6317 Ahg478196 LMBR1-like membrane protein
85.44 Ahg935279 IQ-domain 14
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression