Detail



ID : Ahg493877

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|493877|fgenesh2_kg.7__3310__AT5G41000.1
Sequence
GAAATCTGCC GGGAATTCTC AATTTTTTGG AAAAGAAGTA GCTTTTTGTT GTTATGGAGA CAGAGATTCC AAGGTCAACG GAGATATCAG AGACATTGTT GTTACCTGCG ACAAATCTCG ATCCCGATGA AGATGTACCC GAGTGGAAGG ACCAGATCAC GATCCGAGGC TTAATCTCTA GCGCCTTGTT AGGGATTTTG TTCTGTATCA TTACCCATAA GCTCAATCTA ACAATCGGAA TCATTCCTTC GCTAAACGTA GCTGCTGGTC TTCTCGGCTT CTTCTTCATC AAGTCGTGGA CTGGGTTCTT GTCTAAATTA GGGTTTTCAT CTAAACCCTT TACTAAGCAA GAGAACACTG TTATTCAGAC TTGTGTTGTC TCCTGTTACG GCCTTGCTTA TAGCGGAGGA TTTGGTTCAT ATTTGATAGC TATGGATGAT AGGACATATA AGCTCATTGG TTCTGATTAT CCTGGAAACA ATCCTGAAGA TGTTATAAAT CCTGGATTGT GGTGGATGAC TGGGTTTTTA TTTGTAGTTA GCTTCCTCGG TCTCTTCAGT CTCGTTCCAC TTCGTAAGGT GATGATTTTG GACTACAAGC TTACATATCC CAGTGGAACC GCTACAGCGA TGTTGATTAA CAGTTTCCAC AACAACACTG GAGCTGAGCT TGCAGGAAAC CAAGTTAAAT GTCTTGGGAA ATACCTGAGC CTTAGCTTAT TTTGGAGTTG CTTCAAGTGG TTCTTCAGTG GTATTGGAGA TGCATGTGGC TTTGATCACT TTCCCACACT TGGTTTGACG CTGTTCAAGA ACACGTTTTA CTTTGATTTC AGTCCTACTT TTATTGGATG TGGTATGATA TGTCCCCATT TGGTGAACTG TTCGGTTCTT CTCGGTGCTA TCATTTCTTG GGGTTTCCTC TGGCCATCCA TATCACAGCA TGCTGGGGAT TGGTATCCAG CTGACCTTGA GGCCAATGAT TTCAAAGGTC TCTATGGATA TAAGGTCTTT ATCGCCATTG CTATCATCCT TGGTGACGGT CTTTACAACC TCATTAAGAT CATTATTGTC ACTGTGAAGG AAATCTGCAA CAAAAGCTCC AAACAACAAC ACCTACCTGT CTTTACCGAC ATTTTAGATA AAAGCAAGAC CTCAGAATTA ATGCGGGAGA AGAAGAAAAG AGATGACATA TTTCTCAAGG ACCGTATACC CCTCGAGTTT GCGGTTTCTG GTTATGTGGG TCTTGCAGCC ATTTCAACTG CTATAATCCC ATTGATATTC CCACCATTGA AATGGTACTT TGTCCTCTGT ACATACTTAG TTGCCCCGGG TCTTGCTTTT TGCAATTCTT ATGGAGCCGG GCTCACGGAT ATGAGCATGC CTTCAACCTA CGGAAAGACT GGTCTTTTCA TCGTTGCTTC AATTGTAGGA AATAACGGTG GAGTCATTGC CGGTTTAGCA GCCTGTGGCA TTATGATGTC AATCGTCTCA ACTGCAGCGG ATCTCATGCA GGACTTTAAA ACAGGTTACC TCACACTATC ATCTGCAAAA TCCATGTTTG TAACTCAGCT TTTGGGTACA GCAATGGGTT GCATAATCGC CCCTCTCACG TTCTGGCTGT TTTGGACTGC TTTTGACATT GGAGATCCTG ATGGTCTATA CAAAGCACCT TACGCAGTTA TCTACCGCGA AATGGCTATC CTCGGGATCG AGGGCTTTAC AAAACTGCCC AAGCACTGTT TGGCTCTATG TTGCGGATTC TTCATCGCTT CTCTGATTGT AAATCTAATT AGAGAAATCA CACCACCAAA GATCTCTAAG TTAATACCAC TTCCAATGGC TATGGCTGGT CCATTTTACA TAGGAGCATA CTTCACCATC GACATGTTCA TAGGAACCGT GATTATGTTC GTATGGGAAC GGATGAATAA GAAAGACGCA GATGATTACT CGGGTGCAGT AGCTTCAGGA CTGATCTGCG GCGATGGAAT CTGGACCATC CCATCCGCAG TTCTTTCAAT ATTAAGAATC AATCCACCCA TCTGTATGTA CTTTGGACCA TCCTAGACAT TGTTATCATA TTAAAAGTTT GTTGCATTAT 
Length2100
Protein Sequence
Protein Residue
Map Locationscaffold_7: 20531338.. 20535122
Download Sequence
A.thaliana
AGI-codeAT5G41000.1
DescriptionYELLOW STRIPE like 4
TAIR curator summaryArabidopsis thaliana metal-nicotianamine transporter YSL4
Alias[AtYSL4][YSL4][YELLOW STRIPE like 4]
Gene coexpression
MR
MR Locus Description
6.32456 Ahg480584 Mechanosensitive ion channel family protein
27.6043 Ahg937473 Protein of unknown function (DUF1997)
30.4138 Ahg916349 BTB/POZ domain-containing protein
36.0555 Ahg911203 fucosyltransferase 9
71.8331 Ahg323748 serine carboxypeptidase-like 36
77.3628 Ahg942564
96.5609 Ahg941040 biotin carboxyl carrier protein 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression