Detail



ID : Ahg493878

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|493878|fgenesh2_kg.7__3311__AT5G40990.1
Sequence
ATGGAAAACT CTCAATTAGT TTCGATCACT TTCTTAGCTT ACACAATAAT CATATCAGTC GGCTCCATCA ACTGCATAGA CAACAACAAT CTGGTAACAA ACCAATCCGC TTTGTTCGTG TTTGGAGATT CTGTGTTCGA TGCTGGAAAC AACAACTACA TCGATACTTT CTCTAGTGTC CGGTCTAATT ACTGGCCGTA TGGTCAAACA ACATTCAAAT CCCCTACTGG AAGAGTCTCC GACGGACGTT TGATTCCTGA TTTCATCGCG GAGTACGCAT GGTTACCATT GATCCCACCA AATTTACAAC CACTCCACGG TAACAGCCAA TTTACCTATG GGGTAAATTT TGCTTCAGGT GGCGCCGGAG CTTTGGTCGG AACCTTTTCC GGATTGGTGA TAAATTTGAG AACACAATTA AACAACTTCA AGAAGGTTGA AAAAATGTTG AGGTCTAAGT TAGGAGATGT TGAGGGGAAG AGGGTTATCT CAAGAGCTGT TTATTTGTTT CATATTGGAC TCAACGATTA TCAATATCCG TTCACTACAA ACTCTTCCAT TTTTCAATCC ATTTCCAACG AGAAATACGT CGATTATGTT GTTGGTAACA TGACAGACGT TTTCAAGGGA AGGAAGTTTG GATTCTTGAA CACAGGACCA TACGATTGTG CACCAGCCTC ATTGGTTATA GACCAAACAA AGATAGGATC TTGTTTTCAG CCGGTCACTA AGCTGATCAA TCTGCACAAC AAGAAGCTCC TGAATGGTTT GAGGCGGCTA AATCATGAAC TATCCGGATT CAAATACTCC CTCCACGACT ATCACACTTC CCTCTCGGAA AGAATGAATA ATCCTTCAAA ATACGGGTTC AAGGAGGGGA AGAAGGCATG TTGTGGAAGC GGACCATTGA GAGGAATCAA TACGTGTGGA GGCCGAATGG GACTGTCACA AAATTACGAG TTATGTGAAA ACGTTACAGA CTATTTGTTC TATGATCCTT TTCATTTGAC GGAAAAAGCT AATCAGCAGA TCGCTGAGCT GATTTGGAGC GGACCGACCA ACATCACTGG ACCCTATAAT CTCAAAGCGC TGTTTGAACT TAACTAA 
Length1107
Protein Sequence
Protein Residue
Map Locationscaffold_7: 20536683.. 20538150
Download Sequence
A.thaliana
AGI-codeAT5G40990.1
DescriptionGDSL lipase 1
TAIR curator summaryComponent of plant resistance. Contains lipase signature motif and GDSL domain. Directly interferes with the fungal infection process by acting on fungal cell walls through its action as a antimicrobial compound. Critical component for both local and systemic resistance responses in the incompatible interaction with Alternaria brassicicola in the ethylene-dependent pathway.
Alias[GLIP1][GDSL lipase 1]
Gene coexpression
MR
MR Locus Description
3.87298 Ahg313807 alternative oxidase 1D
6.9282 Ahg354029
7.34847 Ahg918583 Auxin efflux carrier family protein
9.53939 Ahg900529 Concanavalin A-like lectin protein kinase family protein
10.198 Ahg483400 NAC domain containing protein 42
11.6189 Ahg929930
11.6619 Ahg892751
12.6491 Ahg483895 myb domain protein 2
12.8062 Ahg930349 ethylene response factor 1
13.6382 Ahg486481 Glycosyl hydrolase superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression