Detail



ID : Ahg930349

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|930349|scaffold_302806.1
Sequence
TATTTTTCTT CGGTTTCTAC ATGGATCCAT CTTTTCTTCA GTCACCGTTA TCTAGCTTCT CGCCGGAATA TTCTACCGGA TCTTCTCCGG AATCTTTCTC TTCCTCTTCT TCTAATAACT ACTCTCTTCC CTTCAACGAG AACGACTCAG AGGAAATGTT TCTCTACGGT CTAATCGAGC AATCCACGCA ACGAAACTTC ATCGAATCGA ATCTTCAAGA CCTTCCGGTC AAATCCGTAA GCTCAAGAAA CTCAGAGAAG TCGTACAGAG GTGTAAGACG ACGGCCATGG GGGAAATTCG CGGCGGAGAT AAGAGATTCG ACTCGAAACG GTATTCGGGT TTGGCTCGGG ACGTTCGAAA GCGCGGAAGA GGCGGCTCTC GCCTACGATC AAGCCGCTTT CTCGATGAGA GGTTCTTCGG CGATTCTCAA TTTTTCGCCG GAGAGAGTTC AAGAGTCGCT TTCGGAGATT AAGTATACCT ACGAGGATGG TTGTTCTCCG GTTGTGGCTT TGAAGAGGAA ACACTCGATG AGACGAAGAA TGACCAATAA GAAGACGAAA GACAGTGACT TTGTTCACCG CTCCGTGAAG TTAGATAATG TTGTTGTCTT TGAGGATTTG GGAGAACAGT ACCTTGAAGA GCTTTTGGGT TCGTCTGAAA ATAGTGGGAC TTGGTGAAAG ATTAGGATTT GTGTTTA 
Length697
Protein Sequence
Protein Residue
Map Locationscaffold_3: 9974433.. 9975125
Download Sequence
A.thaliana
AGI-codeAT3G23240.1
Descriptionethylene response factor 1
TAIR curator summaryencodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ERF1). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. EREBP like protein that binds GCC box of ethylene regulated promoters such as basic chitinases. Constitutive expression of ERF1 phenocopies ethylene over production. Involved in ethylene signaling cascade,downstream of EIN2 and EIN3.
Alias[ATERF1][ERF1][ETHYLENE RESPONSE FACTOR 1][ethylene response factor 1]
Gene coexpression
MR
MR Locus Description
6.63325 Ahg313807 alternative oxidase 1D
9.94987 Ahg493376 VQ motif-containing protein
12.8062 Ahg493878 GDSL lipase 1
13.0384 Ahg488124 WRKY DNA-binding protein 75
14 Ahg470633 octadecanoid-responsive Arabidopsis AP2/ERF 59
15.3948 Ahg483895 myb domain protein 2
22.8473 Ahg484673 NAC domain containing protein 3
26.7395 Ahg473935 myb domain protein 112
27 Ahg494028 NAC domain containing protein 6
27.3679 Ahg478996 NAC domain containing protein 3
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression