Detail



ID : Ahg494333

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|494333|fgenesh2_kg.8__149__AT5G46390.2
Sequence
TTTGAATCTT GACCGTTAAA AAAAGATGAG GCTTTTGCTT CCATTTTCAT CGCCGTTATC CGCCACGTCA TCACCGGCGA CGCCGCAATT TCTCCCGGAA TATACACTTC CGTCTCAATT CGACTACTCT GCCCTTAGTA AAATTCTCAA AAAATCGGTA ATCGGAACCC TAACCGGAGC TCTCTCGCTC ACTCTCGTTT TCTCGTCGCC GATTTCCTCC GTTGCTGCTA CTAATGATCC TTATCTCTCT CTCAATCCTC CTTCTTCATC GTTTGAATCT TCACTGAATC ACTTTGATTC GTCTCCGGAG GATTGTCCTA ACGAGGAAGA AGCTGATACT GAGATTCAAG ATGATGACTT TAAGCCTCAA TTAGTAACCA ATGAAGGGAT TGTTGAAGAA GCTTGGGAGA TTGTTAACGG TGCCTTTCTC GATACTCGTA GCCATAGTTG GACTCCTGAA ACTTGGCAGA AACAGAAGGA TGATATATTG GCTAGTCCAA TTAAGAGTAG ATCAAAGGCT CATGAAGTGA TTAAGAATAT GTTGGCAAGT TTGGGTGATC AATACACTCG ATTTCTATCA CCAGATGAGT TTTCTAGGAT GTCGAAGTAT GACATTACTG GTATTGGAAT AAACCTTAGA GAAGTTTCTG ATGGTGGTGG AAATGTAAAG TTGAAGGTTC TTGGTCTTGT ATTGGACAGT CCTGCTGATA TTGCTGGTGT GAAACAGGGA GATGAAATTC TTGCTGTCAA TGGAATAGAT GTTAGTGGGA AATCATCATT TGAAGTATCA TCTTTGTTGC AAGGCCCTAG TAAAACTTTT GTGGTTCTCA AGGTGAAGCA TGGGAAGTGT GGACCTGTTA AGTCTCTTAA AATCCAGAGA CAAGTTAATG CACTGACCCC AGTCTCTTAT CGGTTGGAAA AAGTTGACAA TGGAACAGTC TCTGTCGGGT ATATTCGCCT GAAAGAGTTC AATGCTCTGG CTAGAAAAGA TTTGGTGATT GCAATGAAAC GACTCCAAGA CAAGGGTGCG TCTTATTTCG TAATGGATCT TAGAGATAAC CTTGGTGGAC TTGTGCAGGC TGGAATAGAA ACTGCTAAGT TGTTCCTAGA TGAAGGGGAT ACGGTGATAT ATACAGCTGG GAGAGACCCC GAGGCTCAAA AAACTGTTGT TTCAGATAAG AAACCGTTGA TCACTGCCCC ACTTATTGTA ATGGTAAATA GCAGAACAGC AAGTGCTAGT GAAATTGTGG CCTCTGCACT TCATGATAAC TGTAAAGCAG TTCTCGTTGG CGAAAGAACT TACGGAAAGG GTTTGATTCA ATCGGTGTAC GAACTCCGAG ATGGTTCAGG AGTTGTTGTG ACAATAGGAA AGTACGTCAC ACCTAACCAT ATGGACATCA ATGGTGGTGG AATTGAACCT GATTTCAGAA ATTTACCAGC TTGGGATGAA GTTAAAGAAC GTTTATCTAA GTGCAATATT CTCCAACGAA GTTGACGTGC AACGAAACTC ATCAAGCTTT GTACTTATTA TTCTTTGCTT AAACCACAAC AAAAAAAAAA TAAAAATATG GGTCATTCTT GATCTTCTGG AC 
Length1592
Protein Sequence
Protein Residue
Map Locationscaffold_8: 1003304.. 1006039
Download Sequence
A.thaliana
AGI-codeAT5G46390.2
DescriptionPeptidase S41 family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
6.9282 Ahg478742 Ubiquitin-conjugating enzyme family protein
9.21954 Ahg487667 Nucleotidylyl transferase superfamily protein
15.906 Ahg319546 phytochrome interacting factor 3-like 5
16.4317 Ahg935024 Tetratricopeptide repeat (TPR)-like superfamily protein
17.8885 Ahg349470 Mitochondrial substrate carrier family protein
19.799 Ahg477997 plastid developmental protein DAG, putative
20.5913 Ahg894515 indole-3-acetic acid inducible 28
22.0907 Ahg951726 tRNAHis guanylyltransferase
22.8035 Ahg926633 cinnamyl-alcohol dehydrogenase
26.1725 Ahg491603 Protein kinase superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression