Detail



ID : Ahg494414

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|494414|fgenesh2_kg.8__230__AT5G45710.1
Sequence
GTTGTTGTTG CCATTCATAC GCGCTTCCAT CAACCCTTTG GTCTTGGAAG CCAAATCAAA CCTTTCAATC CTCAAATTTG CTTTACGTTC TCTCAATTCA TATTTTTAAG AAAGTCTGTT CCTTTAATCA ATCAAATCAA ATTGTTTCCC AATTTGCGTC AATCGGGATC GAGTCAAATC TTCTTCCACT CATCATCTGG ACAATAGATT GAATCAAGGG AATTTTTGTT CGGGTTCTTG GATTTGAAGT GGTTAAGGGA TGGATGAAAA TAATGGAGGT TCAAGCTCAC TTCCACCTTT CCTTACTAAA ACATATGAAA TGGTAGATGA TTCGTCTTCT GATTCGATTG TTTCTTGGAG CGAAAACAAC AAAAGTTTTA TCGTCAAGAA CCCAGCGGAG TTTTCAAGAG ACCTTCTTCC GAAGTTCTTC AAGCATAAGA ATTTCTCAAG TTTCATCCGT CAGCTTAATA CATATGGTTT TCGAAAAGTT GATCCTGAGA AATGGGAATT CTTGAATGAT GATTTTGTTA GAGGTCGACC TTACCTGATG AAGAACATTC ATAGACGAAA ACCGGTTCAT AGCCACTCGT TACAGAATCT ACAAGCGCAA AATCCTTTGA CGGAATCAGA AAGACGGAGC ATGGAGGATC AGATCGAAAG ACTGAAAAGG GAGAAAGAAG GCCTTCTTGC GGAGTTACAG AACCAAGAGC AAGAACGGAA AGATTTCGAG CTGCAAGTAA CGACATTGAA AGATCGGTTA CAACATATGG AGCAACATCA GAAATCAATA GTGGCATATG TTTCACAGGT TTTGGAAAAA CCAGGACTTT CTCTAAACCT CGAAAACCAT GAGAGAAGAA AAAGAAGATT TCAAGAGAAT TCTCTTCCTC CAAGCAGTTC ACACATAGAA CAGGTCGAAA AGTTAGAATC TTCTCTAACT TTTTGGGAGA ATCTTGTATC GGAATCATGC GAAAAGAGCG GTCTGCAGTC ACCAAGCATG GATCTTGATG CAGCTGAGTC AAGTCTAAGT ATTGGCGATA CCCGACCCAA ATCATCAAAG ATAGATATGA ACTCAGAGCC ACCCGTTACC GTTACCGCAC CTGCTCCAAA AACAGGGGTT AACGACGACT TTTGGGAACA ATGTTTGACA GAAAACCCGG GATCAACAGA GCAACAAGAA GTTCAGTCAG AGAGAAGAGA TGTCGATAAC GATAAGGGAA ATACGATTGG AAATCAAAGG ACGTTTTGGT GGAATTCAGG GAATGTAAAT AACAACATTA CAGAGAAAGC TTCTTGATAT GAATGAGGTT TTTGTAAAAT AGATTTTTCT TTTGTTACTT CCTCTGAGAT TATTGTATTC GTGTTCATTA TTTATTACT 
Length1379
Protein Sequence
Protein Residue
Map Locationscaffold_8: 1413369.. 1415352
Download Sequence
A.thaliana
AGI-codeAT5G45710.1
Descriptionwinged-helix DNA-binding transcription factor family protein
TAIR curator summarymember of Heat Stress Transcription Factor (Hsf) family
Alias[AT-HSFA4C][HSFA4C][RHA1][HEAT SHOCK TRANSCRIPTION FACTOR A4C][ROOT HANDEDNESS 1]
Gene coexpression
MR
MR Locus Description
33.0454 Ahg488961
38.3797 Ahg891488 Disease resistance protein (TIR-NBS-LRR class) family
57.0088 Ahg890558 P-loop containing nucleoside triphosphate hydrolases superfamily protein
82.8493 Ahg472633 Protein of unknown function (DUF1645)
87.8635 Ahg477807 RING/U-box superfamily protein
98.0408 Ahg906541 Plant regulator RWP-RK family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression