Detail



ID : Ahg494460

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|494460|fgenesh2_kg.8__276__AT5G45230.1
Sequence
ATGGTGACAG CTTCGGACGT CAAAGTAGGA CCAGAAGTGT TTATCAATTT CCGAGGAGTT GAGCTGCGCA AGACCTTCAT CTCCCATCTC CATACAAGAT TGCGACGGGA TGGAATCAAT GCTTTTATAG ATTCTGATGA AGCTCCTGGC AGAGAACTCA AAAACCTTTT CAAAAGGATT GAGGATTCAA AGATCGCGCT GGCGGTTTTA TCGAGTAGGT ACACCGAGTC ACATTGGTGT TTGCAGGAGC TAGTTAAGAT GATGGAATGT AGTCCGAAAG GTGAAGGATG CAATAACAAG TTATTGGTCA TTCCAATCTT CTACAAGCTG AAGATATCTA CAGTGGCAGA GCTTGATGGA GATTTCGGTC GTAATTTGTG GGATCTCTGG AGGTTGCCTG GTCGCGGTCG TGATCGAGAC AACCGGATTG TTAAGTGGAA CGAGGCTTTG CAGGATGTTC TCAGCAGAAA CGCCTTGGTA TTGCCAGAAA CTGGCAAGGA AGACGATTTC TTGTCTACGA TCGTCGCACA TGTTAAAAAT GCCCTAAGCC AAATTACACC GCAAAGAGGA CAAAACCCTA AACCACAGAA AGGGGGAGGA GGAGGAGGAA ACCCTAAGCC CCAAAAATTT CTTAGCAGAG CATCAAACAT TACTGAACCA GAGGATCAAC GCCTTAAGCA ACTGGAAGTA AAGTTGAATG TGGAGTGCAA TGACAACGAA ACTCGTATTG TTGGAGTCGT CGGGATGCCT GGAATCGGAA AAACCTATCT CGCCAGGAAA CTCTTCGTCA AGCTTAAGAA GAAGATCAAC CATTGTGTGT TCATCGAGTT CGAGCGTGAG AAGTCAGAGG AGCAAGGATC AGAGTGGCTA GAGAAGAGGC TTGTGGAAAG TTTACTGGAT ATTAAAAATT GCACTGATAC AAATGCACTT GTGGTTTGGA AGGATAGCTT AATCAACAAG AAAGTCACGA TTGTTTTAGA TAACGTGAGT GAGAAGAAAC ACTGGATTAA GAAGGGGAGC AAGATCGTCA TCACGACACG AGACAAGTCA TTGACCGAGG GATTAGTCTC TGATCTCTAT GAGGTCCCTG GGTTGAATGA GAGAGACGGC TTAGAGCTCT TTAGGGCTCA AGCCTGTTGT ACTCTTGATG GAAATTTCAT GGAGCTGTCT AGAAAGTTTG TGGATTATGC AGGAGGCAAC CCATTAGCTC TCGAGCAATT TGGTAAGGAG CTTCGCGGGA AAGATGTGGT TCACTGGGAA ACAAGACTTG GTACACTGGC ACAGTGTTCC AATCCAACGA TCAGAGAGAA GTTAAGAAGC TCTTATGATG AACTAAACGA GCAGCAGAAG GATGCGTTTC TTGATATAGC TTACTTCTTT AGGTCACAAG ATGAGAGCTA CGTTAGAAGC TTACTTGATT CTTATGACCC TGAATCCGCG GAATCTGGAC ATGAATTTAG AGATCTCGCA GACAAATTCT TGATTGGCGT GTGTGATGGT CGAGTTGAGA TGCATGATCT CTTGTTTACA ATGGCCAAGG AGCTTGTTGA AGCCACTGCA GATAAATCAA GACTGTTGCT GTCGAATTGT GCAGAGTTGA GAAATAAAGA GTTGTCACTT GATCAACAGG GAAGAGACAA GGTTAGAGGA ATTGTTTTAG ACATGTCTAA AATGGACGAA ACGCCATTAA AGAGAGAAGT TTTTGTCGGT ATGAGTAGTC TACGGTACCT GAAAGTGTAC AATTCTCTTT GTCCTCCTCA CTCTGAAACT GAGTGCAAGT TAAACTTACC TGATGGACTT GAGTTTCCAA AACATAATGC TGTCCGATAT TTTCACTGGG TGAAATTCCC AGGGACGGAA CTTCCATAAG ACTTTGACCC CAATAATCTC ATCGATCTTA AGTTACCTTA CAGCAATATT ATCACTGTAT GGATTTGTAC TAAGGTTGCA CCTAATCTGA AGTGGGTTGA TCTCAGCCAC TCGAGTAACT TGAATTCTTT GATGGGTTTA CTAAAAGCAC CAAATCTTTT GAGATTAAAC CTTGAAGGCT GCACAAGTTT AAAGGAGTTA CCTGATGAGA TGAAAGAGAT GACAAATCTT GTTTTCCTGA ACTTAAGAGG ATGCACAAGC CTCTTGTCTC TACCAAAGAT CACTATGGAT TCCCTCAAGA CTCTGATTCT CAGTGGCTGC TCAAAATTAC AGACATTTGA GGTGATTTCG GAACGTCTAG AATCTCTATA CTTAAACGGC ACATCGATAA ATGGACTTCC TCCAGCCATT GGTAATCTCC ATAGACTTAT CTTATTGAAT TTGAAAGATT GCAAAAATCT TGCAACTCTT CCTGATTGTC TTTGGGAGCT TAAATCTCTT CAAGAACTCA AACTCTCTCG CTGTTCAGAG CTCAAAATGT TTCCTGATGT TAAGAAGAAA GTGGAAAGCT TGCGGGTTTT ACTGCTTGAT GGTACATCAA TAACAGAGAT GCCATGCAAT ATTTTTGACT TTTCTTTGCT ACGACGCCTA TGCTTAAGCA GAAATGATAA TATCCGCACC CTTCGATTTG ACATGGGTCA AATGTTTCAC CTGAAGTGGC TCGAGTTAAA GTGGTGTAAG AATCTCACAT CTCTTCCCAT ACTTCCACCA AATCTTCAGT GCTTAAATGC ACATGGCTGT ACTTCCCTAA GAACAGTCGC CAGTCCGCAA ACCCTTCCTA CACCAACAGA GCAGATTCAT TCCACCTTTA TTTTCACTAA CTGTCACGAA CTAGAACAAG TCTCAAAGAA TGCTATCATT TCTTATGTTC AGAAAAAAAG CAAGTTGATG TCAGCTGATC GATATAATCC AGATTTTGTT TTTAAATCCT TGATTGGTAC TTGCTTTCCG GGATGTGAAA TACCTGCATG GTTTAACCAC CAATCATTGG GATCAGTCTT AACGCTGGAA CTTCCTCAAG ATTGGAATGC AGCTGGTAAA ATAATAGGGA TAGCTCTATG TGTTGTAGTC TCGTTTAAGG AGTACAGAGA CCAAAACAAC AGTCTCCAAG TGAAGTGCAC TTGGGAGTTT ACTAATGTAT CATTGAGCCC CGAAAGTTTC ATGGTTGGTG GTTGGTCTGA ACCAGGCGAG GAGACACATA CGGTTGAGTC AGACCATACT TTCATTGGCT ACACCTCTTT GCTTACTATC AAGAACCGTC AACAGTTTCC ATCAGCTACA GAAATTTCCC TTGGATTTCA AGTGACAAAT GGTACAAGCG AGGTCGAAAA ATGCAAGGTG ATAAAGTGTG GCTTCTCTTT GGTGTATGAG CCTAATGAAG CTAATAACAC ATCTTGGAAG GAAACTCCAA GGATGGAGGA TAATAGACAA GACCGGAGAA GCTCTTTTAA AACTGGAGAA GGTGATGACT GCCCCAGTGC AACTCCAACA ACAGCGGATT CTAATAAGGG GAATGGTTTT CTCAGTAGTT TCTGGAGAGA CATATCTATT AAAAAAAAAG GAAGTTTGAA GATTGCAAAC CAGATTGACG TGGGTATGAC TTATGAGGAA GTACATCCAA ATGAAGTGTC AGAA 
Length3564
Protein Sequence
Protein Residue
Map Locationscaffold_8: 2186385.. 2192104
Download Sequence
A.thaliana
AGI-codeAT5G45230.1
DescriptionDisease resistance protein (TIR-NBS-LRR class) family
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
11.4891 Ahg475563 ribulose-bisphosphate carboxylases
14.2829 Ahg892255 RNA-binding (RRM/RBD/RNP motifs) family protein
15.6525 Ahg942545
23.388 Ahg915600 Disease resistance protein (TIR-NBS-LRR class) family
29.2575 Ahg924476
31.7333 Ahg952678 Cytochrome C assembly protein
32.4962 Ahg890843
33.4365 Ahg952342 transposable element gene
61.2536 Ahg897577 Domain of unknown function (DUF1985)
73.2666 Ahg896275
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression