Detail



ID : Ahg952678

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|952678|scaffold_900029.1
Sequence
TAATTTTTAA CAAATTTTTT ATGATTTTTT CAATTTTAGA GCATATATTA ACTCATATAT CTTTTTCGGT CGTTTCAATT GTACTGACAA TTTATTTTGT AACTTTATTA GTTAATTTAG ATGAAATCAT AGGATTTTTT GATTCATCAG ATAAAGGAAT CATAATTACG TTTTTTGGTA TAACAGGATT ATTATTCACT CGTTGGATTT ATTCAGGACA TTTTCCATTA AGTAATTTAT ATGAATCATT AATTTTTCTT TCGTGGGCTT TTTCAATTAT TCATATGGTT TCCTATTTTA ATAAAAAACA ACAAAATAAC TTAAACGCAA TAACTGCGCC AAGTGTTATT TTTATTCAGG GTTTTGCTAC TTCAGGTCTT TTAAACAAAA TGCCTCAGTC TGCAATATTA GTACCAGCTC TCCAGTCCCA GTGGTTAATG ATGCACGTAA GTATGATGAT ATTAGGCTAT GGCGCTCTGT TATGCGGATC ATTATTATCA ATAGCTCTTC TAGTGATTAC ATTTCGCAAA GTTGGACCTA CTTTTTGGAA AAAGAAAAAA AAAAAAAATT TTTTATTAAA TGAATTATTT TCTTTTGATG TACTTTACTA CATAAATGAA AGAAATTCTA TTTTACTACA ACAAAACATT AATTTTAGTT TTTCTAGAAA TTATTATAGG TATCAACTGA TTCAACAATT AGATTTTTGG AGTTTTCGTA TTATTAGTCT TGGATTTATC TTTTTAACCG TCGGCATTCT TTCAGGAGCT GTCTGGGCTA ATGAGACATG GGGTTCATAT TGGAACTGGG ACCCAAAAGA AACTTGGGCA TTTATTACTT GGACTATATT CGCAATTTAT TTACATATTA AAACAAATAG GAATGTTAGG GGTATAAATT CTGCAATTGT GGCTTCGATC GGTTTTCTTT TAATTTGGAT ATGCTATTTT GGCGTCAATC TTTTAGGAAT AGGTTTACAT AGTTATGGTT CATTTACATC GAATTAAAGT AACAAACAAA AAGGAATCCA AATCTAAATA AAAAAAAATA GCATCTATAT CTAACTTCAT ATAAATTAAG AAATCTTAGT AGGAAATAAT CAAGAACCTT TTGAATCAAG TAGTACAATG ATTCAAAAGG TTCTCACAAT ACAAAGACCA AAGACTTCTT ATTATAATTC ACTTTAATGC TTTTTTTTAG TTCCTGAAAA CTATCCATAA AAATAATTAG ATAAAATGGA TTCGACCTTG TCACTTGCTA ATGAGAGCAC AAAATCAGGA TAAATCCCAA TACCAATTAT GGGTAGAAGA ATAGAGATTG AAAGAAATAA CTCTCGGGGT CCAGAATCAA AAAAAGAAAA GTTTTTGACA TTAATTAACT TGTATCCATA GAACATTTGG CGTGACATAG ATAATAAATA TATAGGAGTT AATATCATTC CAATTGCCAT TACAAAAATA ATGAAAATTT TGGAAATTAA GAAATATTTT TGGCTGGTAA TTATTCCAAA AAAAACAATT AATTCTGCAA TAAAACCACT CATGCCCGGC AATGCAAGGG AAGCCATCGA TAAAATAGTG AACATTGTAA ATATTTTTGG AATGGAGATA GCCATTCCAC CCATTTCATC AAGATAAACA AGCCTAATTC TATCATAACT CGTTCCTGCC AAGAAAAAAA GTGCAGCGCC TATAAATCCA TGAGAAATTA TTTGTAAAAT AGCTCCATTA AGTCCAGGAT CCGATAGAAC TAATACCTAT AATTATAAAA CCCATATGAG ATACAGAAGA ATAGGCTATT CTCTTTTTTA AATTACGTTG ACCGGGAGAT GTTGAAGCTG CATAAATTAT TTGGATTGTA CCGACTACCA TCAACCAAGG AGAAAACATA GAATGAGCGT GGGGTAATAA TTCCATATTG ATTCGAACCA ACCCATATGC TCCCATTTTT AATAAGATTC CAGCGAGAAG CATACAGGTA CTGTAATGTG CCTCACCGTG GGTGTCAGGT AACCAAGTAT GTAAAGGTAT AATCGGTGAT TTG 
Length2043
Protein Sequence
Protein Residue
Map Locationscaffold_9: 1599358.. 1601400
Download Sequence
A.thaliana
AGI-codeATCG01040.1
DescriptionCytochrome C assembly protein
TAIR curator summaryhypothetical protein
Alias[YCF5]
Gene coexpression
MR
MR Locus Description
1.41421 Ahg925544 acetyl-CoA carboxylase carboxyl transferase subunit beta
2 Ahg475606 photosynthetic electron transfer A
2 Ahg925488 ATPase, F0 complex, subunit A protein
3.87298 Ahg925461 photosystem II reaction center protein E
4.12311 Virus0603
4.89898 Ahg936827 Ycf1 protein
6 Ahg907865 photosystem II reaction center protein B
6.9282 Ahg906065
6.9282 Ahg925558
7.74597 Ahg952681 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression