Detail



ID : Ahg494507

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|494507|fgenesh2_kg.8__323__AT5G44750.2
Sequence
GAAAATTCCG TTGAAAGCTT CATCTTCTTC TTCTCCGTCT CGCTCTGAGA TTCATCCCCA ACAACTACAA TGAAGCGTAG CTTGGGTTCC AATTCTTCGA ACAATAGTGG CAGTGGAAGT AACAAGAAGA CTAAGAAGAA GAATAATCCG AGCAATCAGA AAACCCTAGG TGCCGCATGG GGCGCTGCTT CTTCTCGTTC TTCTTTCCGG TCTTCTCCTT TCTCTGATTT CGGAAGTTAC ATGGAAGTGA AAAATCGGAA ACTTCAGAAC CAATTTGAGA CTGAGGCTTC TGCTTCTTCT CGTGGTATTT CGGGTTCTGA GAAACTTATT TTCCAAGGGG TTTCAATCTT TGTGGATGGT TTCACCATTC CTTCCCATCA GGAATTACGA GCTTACATGA TAAAGTATGG TGGAAGATTC GAGAACTACT TTTCTAGGCG TTCTGTAACA CATATCATCT GCAGCAACCT TCCAGATAGT AAAGTCAAGA ATCTAAGGGC ATTCAGCAGA GGGTTACCTG TTGTGAAACC CACATGGATA GTGGACTCTA TCTCTGCCAA CAGACTTCTG GGCTGGGTTC CTTACCAGCT AGATCAACTG AATGATACCC AGCCGAAGTT GTCTGCCTTT TTTGCACCCA GAAGCCATTT GACCCCTCGG ATGGCTTCGC CGGTTACATC TTGTCCGCCT GATACTGGAT ACAGTGAAGC TGAAGAAGGA AGTTCAATTA GGGCAGAGCA TTTTGAGGAA GCAAGAGACC ATGTTGATGA TGAATTTGAC GGCGTTTATA TCGGGAACAC TACTCCAGAA CTGACAGAAG AAACAGGAAC TGGTGATCTG AAATCTTCTG AAATGAATGC AGAAAGACTT GCTAATTATG ACATAGAAGA AAAAGAAGTG AGTAGTGAAC TTCAATCAAC TACCAAACTT CATTCCGCTT CAGACAACAA GTCCGTTCAT GCAAATGGGA AGAATGATGG CAAATCGATT GCAACTGCTG CTGGATCTTC TGCAAGGCGT CATTCAACTC TCGAGGATCC CAATTTCGTG GAAAACTACT TTAAGAATTC AAGGCTGCAT TTTATTGGAA CATGGAGAAA CAGGTACCGT AAAAGATTTC ATGGCCCTTC CAATGGACTT AAATGGGCAG ATTCAGGCCA GAATACAGCT GAAATGGACA AGAAGTCAAC CATTATCCAC ATTGATTTGG ATTGCTTCTT TGTGTCAGTG GTAATCAAGA ACCGTCTTGA ATTACACGAC AAGCCGGTAG CTGTATGTCA CTCAGATAAC CCGAAAGGAA CGGCTGAAAT TTCATCTGCA AATTATCCAG CTCGGGCTTA TGGAGTGAAG GCAGGTATGT TTGTAAGACA TGCAAAAGAG CTTTGTCCTC AGCTTGTTAT TGTTCCTTAC AACTTTGAAG CCTACGAAGA GGTAGCTGAT CAGTTTTATG ACATCTTGCA TAGGCATTGC AGAAAAGTCC AGGCACTAAG CTGCGATGAA GCGTTTTTAG ATGTCTCAGA TTTGAGGGAT GTAGAACCCG GATTTTTAGC CTCGACAATA AGGAATGAGA TCCTTGAGAC TACTGGATGC AGCGCAAGTG CTGGGATAGG CGGTACTATG CTAATGGCCC GTCTTGCTAC CAGAGTTGCT AAACCAGCCG GCCAGCTTTA TATCTCTGCT GAGAAGGTTG AGGAGTTCTT GGATGGGCTT CCAGTCGGGA CACTACCTGG TGTAGGTTCT GTGTTGATGG AGAAGCTGGT GAAGCAAAAT ATTCAAACCT GTGGGCAGTT ACGTTTGATT TCCAAGGATT CTCTTCAAAA GGATTTTGGG GTGAAAACCG GCGAGATGCT CTGGAGTTAT AGCAGAGGAC TAGACCTACG GTCAGTTACA GCAGTGCAGG AGAGTAAGTC CATAGGGGCT GAAGTGAATT GGGGTGTGCG GTTCAGAGAT CAGCAAGATG TCTGTATTCT CGTTCAACAC TTCCTCCAAT GCCTATGCAA AGAAGTTTCT TTGCGTCTGC AAGGATGTGA AATGATAGGA CGCAATTTTA CTCTTAAGAT AAAAAAGAGA AAAAACGATG CTGAAGAACC TACAAAGTAT ATGGGTTGTG GAGACTGTGA CAATCTGAGT CGTTCCATCA CTGTGCCTAC TGCTACAGAT GACGTAGAAG TTCTGCAGAG GATTTCAAAG AAGTTGTTTG GGTCATTTTG CTTGGATGTT AAGGAAGTTC GTGGGGTTGG GCTTCAGGTC TCTAAGCTTG ACAGTGCAGA TCCTTCTAAT AAAGGTTCAA GGACTCTGAA ATCATGGCTC AGCTCTGCAT CTGCCTCTGT CCAAATAGAA CAAGATGATA ATGTTTTTGC TGCAAAAGTT AGGGAAAACT CAGATTGTAA TAGGCATGTT ACTGGTGGAG TTTCTAGACT CCGAGAATCT AATTCAGCAG AATCTTCAAT TCAGTCAGGT GATACAAATT CATCCTTACC GCCTATGTGT CATCTCGACA TGGAAGTTCT AGAGAACCTT CCTCCAGAGC TCCTTTCTGA ATTAGATGGA ACCTACGGTG GGAAGTTGTT TGAGTTGATT GAGAAAAAAC GAGGCAAAGG AAAAATCAAT AGCAATTCTC CACATGTCTC CTTGGATGGC ACTGCTGGTG GCATTAAAGA ATTAAAATCT CTCTCAGTTA AGATACATGG CTTGAGCACC TCTAGAGAAA AGGAATATAA AGAACCGTAT GTGCCGCATC CTTCCATTGC CAGAACTTCT AATCATCGTA CAATAGAAAT GACTGATTTG ATACCTTCAT TCCTTAGTCA AGTCGACGTC TCTGTGTTAC AAGAATTACC TGAAGAATTG AGGGTTGACG TATTGGGAGC ATTTCCTGCC AACAGGAGAC AACAGTCATC ATCAAATGTT CCCATGGAGA CTTGTAAGAA ACAAGATGAG GAGCCGATAG ATATAAAGGG CACTGAGAAT AAGATTGGAT TCTCATGTAG CTCTCGTTGG TTTGGGAATC CTCCTCTTTG GACAGAGAAG TTCAAAGTTA GTGGCAATTG TACTTTGGAA AAACTTTCAG GGATATACTT CAAGGTTGCT CAGTTAAGAC CTATGTTATC CCGGGTCCTA CAACACGCTA TTTCAGAAAT CAGTAGTTTT CATGATGCAG CAAGTGCCAA TGATTTGGAC AAAGCTATAT ACGATGTGTG TGAACTTCTT AAACAGTACA TTAAGCTCAA GGTAGAAGGT GATATTGAAG AGATATATCT CTGCTTCCGA CTTCTGAAAA GATTAGCAGC AAGGAGCCAA CTTTTCCTAC AAGTCTATGA GATATTGTCT CCCTTTATTC AGGCCTCGAT CAGTGAACAC TATGGAGGAA GCTTGAGTAT TCCTTGAAAG ATCTTTACTG AGGTTGGGCT GAAGTCTGGC CGAATGCTAT AAAAGAATGT ATACTTGCAG GACAATGTGG ATCCTGAAGG GCATCATGGT GAATGCACTC GGACAATACA CGAAGCAGCT TAAGAAAACG GCAATAGAAG GCTAGCTAGA TATATTGCTG CAAATTCGCG TGTCAAATGG AGTCTCGAAA ACACCCATTG TGGCATTTGC ACAATGGGAT ATGGAAGTTA TTCAAATCTC AAAGTGCAGA GCCATTAGGA GCAACTACTT TTCTCTGTTC ATAGGAATGT ATCTGAACTT GATAATCATT TCGTCCCATG ACACGAGCGC AGCTGTATAT ATCACCTAGT TCCTTGTTCA TGAATTTTCT TTATTTGTTA AAACGATAAT TTATTCTCT 
Length3789
Protein Sequence
Protein Residue
Map Locationscaffold_8: 2756068.. 2769191
Download Sequence
A.thaliana
AGI-codeAT5G44750.2
DescriptionDNA-directed DNA polymerases
TAIR curator summaryHomologous to Y-family DNA polymerases, contains BRCT domain. Mutants are sensitive to UV-B radiation. Gene is involved in damage-tolerance mechanisms through translesion synthesis(TLS).
Alias[ATREV1][REV1][ARABIDOPSIS THALIANA HOMOLOG OF REVERSIONLESS 1]
Gene coexpression
MR
MR Locus Description
10.8628 Ahg358320 leo1-like family protein
13.4164 Ahg482603 farnesylated protein-converting enzyme 2
24.6982 Ahg331131
29.2404 Ahg483028 ARM repeat superfamily protein
31.7805 Ahg489554 F-box/FBD-like domains containing protein
38.6523 Ahg474163 P-loop containing nucleoside triphosphate hydrolases superfamily protein
45.5412 Ahg890756 Pre-mRNA-processing-splicing factor
50.4381 Ahg481833 pumilio 3
55.7494 Ahg323188 UDP-Glycosyltransferase superfamily protein
61.3351 Ahg332725 DNAse I-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression