Detail



ID : Ahg494557

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|494557|fgenesh2_kg.8__373__AT1G50010.1
Sequence
TAAAAACCTA GAAATCGAAA AAATCAGAGC GTCTTCATAA ACGCCCTTCT TCGTCTTCTT CTTCTTCCCT GCAAATCTAG TTTCTTTCTT CCGCGAAACG AAAATGAGAG AGTGCATTTC GATCCACATT GGTCAGGCCG GTATCCAGGT CGGAAACGCT TGCTGGGAGC TTTACTGTCT TGAACATGGC ATTCAGCCTG ATGGTCAGAT GCCCAGTGAC AAGACTGTTG GCGGAGGTGA CGATGCTTTC AACACCTTCT TCAGTGAAAC CGGTGCAGGG AAGCACGTCC CACGTGCTGT CTTTGTTGAT CTTGAGCCAA CTGTGATCGA TGAGGTTAGG ACTGGTACAT ACCGTCAGCT TTTCCACCCT GAGCAACTCA TCAGCGGTAA AGAAGATGCA GCTAACAACT TCGCCCGTGG ACATTACACC ATTGGGAAAG AGATTGTTGA TCTGTGCTTG GACCGTATCA GAAAGCTCGC TGATAACTGT ACTGGTCTCC AAGGATTCCT TGTCTTCAAC GCTGTTGGTG GAGGCACTGG ATCTGGTCTT GGATCTCTCC TCCTTGAGAG ACTTTCTGTT GACTATGGCA AAAAGTCCAA GTTGGGTTTC ACTGTTTACC CATCTCCACA GGTCTCTACC TCCGTTGTTG AGCCATACAA CAGTGTCCTC TCCACTCACT CTCTCTTGGA ACACACTGAT GTCTCCATCC TCCTCGATAA CGAAGCTATC TATGACATCT GCAGACGCTC CCTAAGCATT GAGCGACCAA CCTACACCAA CCTCAACCGT CTTGTCTCTC AGGTGATCTC ATCCTTGACT GCTTCTCTTA GGTTTGATGG TGCCTTGAAC GTGGATGTCA CTGAGTTCCA AACCAACTTG GTCCCATACC CAAGAATCCA CTTCATGCTT TCGTCCTACG CACCAGTCAT CTCTGCAGAG AAGGCCTTCC ATGAGCAACT CTCAGTTGCT GAGATCACAA ACAGTGCTTT TGAGCCAGCT TCCATGATGG CTAAGTGTGA CCCACGTCAT GGCAAGTACA TGGCTTGCTG TTTGATGTAC CGTGGTGATG TTGTCCCCAA GGATGTGAAC GCAGCTGTTG GCACAATCAA GACCAAGCGC ACTATTCAGT TTGTTGACTG GTGTCCCACT GGGTTCAAGT GTGGTATCAA CTATCAGCCA CCAACTGTTG TTCCAGGAGG TGATCTTGCT AAAGTCCAGA GAGCTGTTTG TATGATCTCA AATTCCACCA GTGTTGCTGA GGTGTTCTCC CGTATTGATC ACAAGTTTGA TCTTATGTAC GCCAAACGTG CTTTCGTTCA CTGGTATGTG GGTGAGGGTA TGGAAGAAGG AGAATTCTCA GAGGCTCGTG AGGATCTTGC AGCATTGGAG AAGGATTATG AAGAGGTTGG TGCTGAAGGT GGTGACGATG AGGATGATGA AGGAGAGGAG TACTAAGAAG GGTGTGGGTT TTATGTGGGC TTTCTATTAT ATTATCTCGT ATTTGTGTGA GTGGGCTCGA AACTCTTACG AGTCTTTGTT GTTTTCCAAA AACCATATTT CTATCTCTTG CTTGTGGCGG TAGCCATTTG TTTTATATTA TGTAGTTTTG TCATATCTCT TATCTACAAG AACTGAATTT AACCTTAAGC TGAGTTTGGT TTGAATCGAT TGTCCAAAAT CTAGAGTGGT GAAAGATTGA AACTTTT 
Length1707
Protein Sequence
Protein Residue
Map Locationscaffold_8: 3273043.. 3275373
Download Sequence
A.thaliana
AGI-codeAT1G50010.1
Descriptiontubulin alpha-2 chain
TAIR curator summaryEncodes alpha-2,4 tubulin. TUA2 and TUA4 encode identical proteins.
Alias[TUA2][tubulin alpha-2 chain]
Gene coexpression
MR
MR Locus Description
1 Ahg474136 tubulin alpha-2 chain
1.73205 Ahg488656 Cobalamin-independent synthase family protein
6.9282 Ahg490872 arabinogalactan protein 18
6.9282 Ahg496451 tubulin beta chain 2
8.3666 Ahg480276 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
9.74679 Ahg485285 IQ-domain 21
9.79796 Ahg478145 Protein of unknown function, DUF642
10.583 Ahg941617 germin 3
12.2474 Ahg470596 Chitinase family protein
15.7162 Ahg478568 fatty acid desaturase 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression