Detail



ID : Ahg494616

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|494616|fgenesh2_kg.8__432__AT5G43890.1
Sequence
ATGGAGAACA TGTTTAGGCT TATGGGAAGT GAAGATTTCT CGGACAGAAA ACGGTGCATT TGGGTTAACG GTCCGGTAAT CGTCGGAGCC GGGCCATCGG GGCTAGCCAC GGCGGCTTGC CTCCGCGAGG AAGGCGTTCC CTTTGTTGTA TTGGAGAGAG CAGATTGCAT AGCTTCACTA TGGCAGAAAC GAACTTATGA TAGAATCAAA CTTCATTTAC CAAAGAAAGT TTGTCAATTA CCCAAAATGC CCTTCCCGGA AGACTACCCG GAATATCCAA CAAAAGGACA GTTCATCGAG TACCTTGAGT CCTACGCAAA CAAATTTGAA ATTACTCCTC AGTTCAACGA GTGTGTCCAG TCAGCTCGAT ACGACGAAAC CAGTGGTCTA TGGCGCATCA AGACAACATC TTCGTCTTCT TCCTCGGTGT CGGAGATGGA ATATATCTGC CGGTGGCTAG TGGTGGCGAC TGGAGAAAAC GCGGAAAAGG TTATTCCAGA GATCGATGGG CTCACAACGG AGTTCAACGG TGAGGTGGTC CACTCGTGTG AGTATAAGTC CGGCGAGAAA TACAGAGGAA AGAGTGTTCT TGTCGTCGGA TGTGGAAACT CCGGCATGGA AGTTTCTCTT GATCTTGCAA ATCACAATGC TAATGCCTCC ATGGTTGTTC GTAGCTCGGT TCATGTGTTA CCAAGAGAGA TTCTAGGCAA ATCGAGTTTC GAAATCTCGG TGATGTTGAT GAAATGGTTT CCTCTATGGC TAGTAGACAA GATCCTACTG ATTCTCGCAT GGCTGATTTT GGGAAATTTG ACAAAGTATG GGCTAAAGAG GCCCAAGATG GGCCCAATGG AGCTCAAGAT TGTCTCAGGG AAGACTCCAG TTCTTGATAT TGGAGCCATG GAGAAAATCA AATCCGGCGA AGTAGAAATC GTTCCGGGAA TTAAAAGGTT CTCTCGTAGC CACGTGGAGC TAGTCGATGG TCAGAGATTA GATCTTGACG CCGTGGTTCT CGCCACGGGT TACCGTAGCA ACGTACCTTC ATGGCTCCAA GAAAATGATC TGTTTTCGAA AAACGGATTC CCGAAATCGC CGTTTCCAAA CGCGTGGAAA GGGAAATCGG GACTTTACGC GGCTGGATTC ACAAGGAAAG GATTGGCCGG AGCATCAGCA GATGCCGTTA ACATCGCTAA AGACATTGGA AACGTGTGGA GAGAAGAGAC AAAACGACAG AAAATGAGAA CACGAGTGGG TCACCGCAGA TGCATTTCAG TTGCTTAG 
Length1278
Protein Sequence
Protein Residue
Map Locationscaffold_8: 3614021.. 3615298
Download Sequence
A.thaliana
AGI-codeAT5G43890.1
DescriptionFlavin-binding monooxygenase family protein
TAIR curator summaryEncodes a YUCCA-like putative flavin monooxygenase, the activation tagging mutant has increased level of IAA, increased auxin response and phenotype of auxin overproduction, rescues erecta mutant phenotype
Alias[SUPER1][YUC5][SUPPRESSOR OF ER 1][YUCCA5]
Gene coexpression
MR
MR Locus Description
3.74166 Ahg484770 TAPETUM 1
5.2915 Ahg900378
7.48331 Ahg342312 ERD (early-responsive to dehydration stress) family protein
15.8745 Ahg329301 Cysteine proteinases superfamily protein
19.1311 Ahg319461 F-box family protein
25.4558 Ahg929770 Protein kinase superfamily protein
27.2764 Ahg940858 Integrase-type DNA-binding superfamily protein
32.3265 Ahg944327 zinc finger (C2H2 type) family protein
32.8329 Ahg341711 phosphatidic acid phosphatase-related / PAP2-related
38.8072 Ahg335836 EF hand calcium-binding protein family
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression