Detail



ID : Ahg484770

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|484770|fgenesh2_kg.5__762__AT3G42960.1
Sequence
GATCGTCAAG AGACAGTAAA CCTAAAATGG CGAACTCAAA CAAGAGATTA TTCCAAAAGG TAGCTATAAT AACCGGAGGA GCAAGAGGGA TCGGAGCAGC CACGGCGAGA CTGTTCACGG AGAACGGTGC ATATGTCATA GTCGCGGATA TCCTTGAGAA TGAAGGCATC CATGTCGCGG AATCCATCGG TGGGTGTTAC GTTCATTGTG ATGTGTCGAA GGAGGCTGAC GTTGAGGCGG CAGTGGAGCT AGCTATGAGA CGTAAAGGTA GACTAGACGT GATGTTCAAC AACGCTGGGA TGACGCTTAA CGAAGGTAGT ATCATGGAGA TGGACGTGGA CATGGTTAAC AAACTTGTTT CGGTCAATGT CAATGGCGTT TTGCATGGCA TCAAACATGC CGCTAAGGCC ATGATCAAAG GGGGAGGAGG AGGATCAATA ATATGCACAT CGAGCTCATC AGGGGTAATG GGAGGACTTG GAGGGCATGC GTATACGCTC TCCAAAGGAG CCATCAACGG GCTGGTGAGG ACAACGGCAT GCGAGCTTGG GTCTCACGGC ATCCGTGTGA ACAGCATCTC TCCTCATGGA GTTCCCACTG ACATCTTGGT TAATGCGTAC CGTAAGTACC TTAACAATGA CAAACTCGAC GTTGCTGAGG TCACCGACAT TGTGGCTGAG AAAGGGAGTT TGCTTACCGG AAGAGCCGGT ACTGTGGAGG ACGTGGCTCA AGCAGCTTTG TTTCTCGCAA GCCAAGAATC GTCGGGGTTC ATTACCGGAC ATAACCTGGT TGTTGATGGT GGTTACACAT CTGCCACTAG TACCATGAGA TTTATCTACA ACTAGTTTTC GTTG 
Length854
Protein Sequence
Protein Residue
Map Locationscaffold_5: 9296239.. 9297440
Download Sequence
A.thaliana
AGI-codeAT3G42960.1
DescriptionTAPETUM 1
TAIR curator summaryArabidopsis homolog of TASSELSEED2. Expressed specifically in tapetal cells.
Alias[ASD][ATA1][TA1][TAPETUM 1][TAPETUM1]
Gene coexpression
MR
MR Locus Description
3.74166 Ahg494616 Flavin-binding monooxygenase family protein
5.38516 Ahg941520 MATE efflux family protein
5.65685 Ahg312221 Pectin lyase-like superfamily protein
8.24621 Ahg495065 ethylene response factor 110
8.48528 Ahg491913 cruciferin 3
9.11043 Ahg477013 Terpenoid cyclases family protein
12.9228 Ahg906315
13.1909 Ahg942130 Leucine-rich repeat (LRR) family protein
13.7477 Ahg476807 Predicted AT-hook DNA-binding family protein
13.8564 Ahg931779 glycine-rich protein 2B
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression