Detail



ID : Ahg494626

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|494626|fgenesh2_kg.8__442__AT5G43790.1
Sequence
ATGACATCTC CAAGCACAAG CAAGAATCAT CGATGCTTAA ACCTAATCTC AAAATGCAAA TCCTTACAAA ACCTCAAACA AATCCATGCC CAAATCATCA CAATCGGTCT CTCTCACCAC ACATATCCTC TAAGTAAACT CCTTCACTTA TCCTCCACCG TCTGCTTATC CTACGCACTC TCTATCTTAC GCCAAATCCC AAATCCTTCC GTCTTCCTCT ACAACACTCT CATCTCCTCC ATCGTCTCCA ATCACAATTC CACTCAAACC CATCTCGCGT TTTCTCTCTA CGATCAGATT TTGAGCTCAA GATCCAATTT TGTTAGACCT AATGAATTTA CTTACCCTTC TTTATTTAAA GCTTCTGGCT TTGAGACGAA ATGGCATCGC CATGGGAGAG CTCTTCATGC CCATGTCTTG AAATTCATCG AACCGGTGAA TCATGATCGG TTTGTGCAAG CTGCTTTAGT TGGTTTTTAT GCGAATTGTG GTGAATTGAG AGAAGCTAGG TCTTTGTTTG AGAGAATTAG AGAACCTGAT TTGGCTACTT GGAACACTCT TCTTGCTGCT TACGCTAATT CTGAAGAAAC TGAGAGTGAT GAAGAGGTTT TGAAGTTGTT TGTTAGAATG CAAGTGAGAC CTAACGAGCT TTCTCTTGTA GCTTTGATCA AATCTTGTGC GAATTTAGGT GAGTTTTGGG GAGGTGTTTG GGCTCATGTG TATCTCTTGA AGAAAAATTT GACTCTAAAC CAGTTTGTGG GGACTTCTCT GATCGATTTT TACTCGAAAT GCGGATGTTT GAGTTTCGCA CGCCAAGTGT TCGATGAAAT GTCTGAAAGA GATATATCAT GTTTTAACGC AATGATTCGT GGTTTAGCGG TTCACGGGTT TGGTCAAGAA GGTATTGAAT TGTACAATAG CTTGATCTCC CAAGGATTAG TCCCAGACAA TGCAACTTTC GTGGTGACGA TATCAGCATG TTCGCACTCG GGTTTAGTTG ATGAAGGTCT CCAAATATTT CACTCGATGA AAACGGTTTA CGGGATCGAG CCTAAAGTTG AGCATTACGG ATGTTTAGTT GATCTACTGG GCCGATCGGG GAGGTTAGAA GAAGCGGAAG AATGCATCAA GAAGATGCCG ATGAAGCCAA ATGCGATGCT ATGGAGATCG TTTCTTGGGT CAGCTCAAAT CCACGATGAC TTGGAGAGGG GTGAAATTGC ATTAAAACAA TTGTTGGGGT TAGAATTCGA AAACAGCGGA AATTATGTGC TCTTGTCAAA TATTTACGCC GGAGTTAACC GTTGGACTGA CGTAGAGAAG ACCCGGGAAC TTATGAAAGA CCACCGTGTC AATAAATCTC CGGGAATTAG TACTATTAAT TAAAATTTAA AATTAATCTC CAAA 
Length1404
Protein Sequence
Protein Residue
Map Locationscaffold_8: 3710870.. 3712324
Download Sequence
A.thaliana
AGI-codeAT5G43790.1
DescriptionPentatricopeptide repeat (PPR) superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
10.247 Ahg330332 regulatory particle non-ATPase 12B
15.6844 Ahg473376 DZC (Disease resistance/zinc finger/chromosome condensation-like region) domain containing protein
21.3073 Ahg946342 Pentatricopeptide repeat (PPR) superfamily protein
24.0416 Ahg492862 Pentatricopeptide repeat (PPR) superfamily protein
37.0405 Ahg481779 Chloroplast-targeted copper chaperone protein
37.9737 Ahg934247 Aldolase-type TIM barrel family protein
43.6119 Ahg472548
66.1816 Ahg947245
76.8245 Ahg915279 Heat shock protein HSP20/alpha crystallin family
88.4873 Ahg478135 Calcium-dependent ARF-type GTPase activating protein family
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression