Detail


ID : Ahg330332

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|330332|fgenesh1_pm.C_scaffold_7002559
Sequence
ATGGATCCGC AACTAACGGA GGTTTCGCAG CAGTTCGAGA GGTTTAAAGC TGCGTTTATA AGAAAAGATT TCGATTCATG TACCAATCTC TTGTCTCAGC TTAAGGTTCT TCTGACTAAG TTCACAAGTC TTCCACCTTT GTTTGAGAAT ACTCCTAATG CAGCTCAAGA ATTGACAATT GCTAGGGATA TTTATGAGTA TGCTGTTGTT TTAAGCGTAA AAACGGAGGA TCAAGACTCG TTCGAGAGAG ATTTCTTCCA GTTGAAACCG TATTATGTTG ATGCTAGGAA TCGCATTCCG TCATCTCCGC AAGAGAATCT AACCCTGGGG TTGAACCTAC TGCGACTGCT TGTTCAGAAC AGAATTGCTG AATTCCACAC TGAGCTGGAA TTACTTTCGT CTGCAACCTT GGAGAATCCT TGCATCAAGC ATGCGGTGGA GCTCGAGCAA TCCTTCATGG AAGGTGCTTA TAACCGTGTG TTGAGTGCTA GACAAACCGC ACCTGATGAG ACTTACGTGT ATTTCATGGA TCTCTTGGCA AAAACCATTA GAGACGAAAT AGCTGGATGC AGCGAGAAAG CGTACGATCA TCTCTCAGTC AGTGAAGGTA GTAAGATGTT GCTCTTCTCT TCTGATCAAG AACTGTTAAC ATATGTAAAT GAGGAGCACC CGGAGTGGGA AGTAAAAGAC GGGTTAGTTG TGTTCCAAAA AGCCAAAGAA ACCGCACCGT GCAAGGAGAT ACCGTCACTT CAACTCATCA ATCAGACTCT CAGCTACGCC AGAGAGCTCG AGCGTATCGT GTAA
Length804
Protein Sequence
Protein Residue
Map Locationscaffold_7: 19925136.. 19926338
Download Sequence
A.thaliana
AGI-codeAT5G42040.1
Descriptionregulatory particle non-ATPase 12B
TAIR curator summary
Alias[RPN12b][regulatory particle non-ATPase 12B]
Gene coexpression
MR
MR Locus Description
10.247 Ahg494626 Pentatricopeptide repeat (PPR) superfamily protein
36.7287 Ahg474517 20S proteasome alpha subunit E1
78.0769 Ahg943407 sequence-specific DNA binding;sequence-specific DNA binding transcription factors
83.8391 Ahg947286 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein
84.2971 Ahg316265 global transcription factor group E3
88.0454 Ahg485847 SNF2 domain-containing protein / helicase domain-containing protein / F-box family protein
98.6306 Ahg481728 Tetratricopeptide repeat (TPR)-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression