Detail



ID : Ahg494773

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|494773|fgenesh2_kg.8__589__AT5G42630.1
Sequence
TAAAAGTGTT GTTTCTGCAG ACCTCTCTCT CTTTCTCTTT TTCTCTTTCC ACACATTCTT GATCTCCACT ATTTAAATAG ACAAGGATTA TAAAGAAAAT AGTGAGATGA TGATGTTAGA TTCAAGAAAC ACTATGAGAG CTTTAAACTC AATCCCAGAT CTGTCCCTTC AGATCAGTCT TCCTAACTCT CACGCCGGAA AACCTCTTCA CGGCGGTGAC CGGAGCTCCA CAAGCAGTGA CTCCGGAAGC AGCCTCAGTG AGTTAAGCCA TGAGAACAAC TTCTTCAACA AACCTCTCTT GAGCTTAGGC TTTGAACATC ATCATCATCA AAGGAACTCA AACATGTTCC AACCCCAAAT CTATGGCCGA GATTTCAAGA GAAGCTCATC ATCAATGGTG GGTCTTAAAC GAAGCATTAG AGCTCCAAGA ATGAGATGGA CTTCTACTCT TCATGCTCAT TTCGTCCATG CTGTTCAACT TCTTGGCGGC CATGAAAGAG CAACGCCTAA ATCAGTGTTG GAGTTGATGA ATGTGAAGGA TCTAACCCTA GCTCATGTCA AGAGTCATTT GCAGATGTAT AGAACAGTGA AATGCACTGA TAAAGGATCA TCAGGAGAAG GAAAGGTAGA GAAAGAGGCA GAGCAGAGGA TAGAGGACAA TAATAATAAT GAAGAAGCTG ATGAAGGAAC TGACACAAAT TCGCCAAACT CATCAACTGT GCAAAAGACC CAAAGAGCTC CATGGTCATC CACAAAGGGA GTACCTAGGA GCATATCTAC ACAAGCAGAT CCTCATTTGG GAACAACTCA ACACACTAAG GAAAATGAGG AGAAAGAGGC GACCAATATT CATCTCAATT TGGAATTCAC ATTGGGGCGG CCGAGTTGGG GGATGGACTA TGCGGAACCG TCTAGCGATT TAACCCTTCT CAAGTGCTAA TTGCCTAACT TGGAGAGCTA CAACAAATAA GCTTAGATTA CCAGGTTTAA CATAATATAT TTAACTTGTT TTGATCATAT GAGCTTTGGA AGAATCATAT TATCATCATA TATGAACTTC TTGCAAGAAT CTTCTATGAG TTTTTTGATA TGTATAATCA AGAAAATCGA TTTAAGTAGT AAGTATTGTT GTAGTGGATG AGAAGGGAGT ACAAGTTCAA GT 
Length1162
Protein Sequence
Protein Residue
Map Locationscaffold_8: 5735383.. 5737429
Download Sequence
A.thaliana
AGI-codeAT5G42630.1
DescriptionHomeodomain-like superfamily protein
TAIR curator summaryEncodes a member of the KANADI family of putative transcription factors. Involved in integument formation during ovule development and expressed at the boundary between the inner and outer integuments. It is essential for directing laminar growth of the inner integument.Along with KAN1 and KAN2, KAN4 is involved in proper localization of PIN1 in early embryogenesis.
Alias[ATS][KAN4][ABERRANT TESTA SHAPE][KANADI 4]
Gene coexpression
MR
MR Locus Description
6.08276 Ahg951554
6.16441 Ahg913323 F-box and associated interaction domains-containing protein
6.9282 Ahg924296
24.3721 Ahg477038 F-box/RNI-like superfamily protein
32.249 Ahg487246 AGAMOUS-like 99
40 Ahg951667 lupeol synthase 1
51.5752 Ahg912288
54.2586 Ahg922136
54.8452 Ahg491811 Phospholipase A2 family protein
61.0246 Ahg331410 Plant invertase/pectin methylesterase inhibitor superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression