Detail


ID : Ahg494971

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|494971|fgenesh2_kg.8__787__AT5G49070.1
Sequence
ATGAACCAAA CGATACACAG AGTTTCCGGT TCAGAGCTGA CGACGCTTCT CAGCTCAGGT GGTTCTGTCT TTGAGATCTT TGCCGCTTTG CTAGTATTGC ATCTGGCCTA CCAAAGAATT AGAGCAAGCG TCAAAGTTTA CTTACTTGAT TTCACTTGTT ACCGAGCACC TGACTCAAAC CGCGTCCCAA TGTCAACTCT TATCGAAACC ATCTACCTCG ATGACAAGCT TGATCAAGAG AGTATTGACT TCCAAGCCCG GATTCTTGAG AGGTCCTGGT TAAGTAACCA AACCAGCATT CCTCCTTCCT TGATGGAAAT ACCCCTCAAG AAATCTCTCT CCTCGGTCAA AATCGAAACC ATGACCACTA TCTTCACCTC TGTTGAGGAT CTCCTGAAGA AAAACAAACT AAGCCCAAGA AGCATAGACA TACTGATAAC AAATTGCAGT TTGCATTCTC CTTCACCGTC TTTAAGTGCA ATGGTGATCA ACAAATTCCA CATGAGAAGC AATATCAAGA GCTTTAACCT GTCCGGGATG GGTTGTGCGG CTGGGATTCT ATCAGTAGGT TTGGCTAATG ACTTGCTAAA GGTTCACCAA GGCTCCTTGG CTCTTATTGT AAGCACTGAA GCGCTGAACA CACATTGGTA CATTGGCAAA GACAGATCTA TGCTTCTTAC CAACTGTCTC TTCCGAATGG GAGCAGCTGC AGTACTGATG TCGAGCAATG ATCATGACAG AGACAATGCA AAGTATGAGC TCTTGCATGT TGTCAGGAAA AATAAAGCGA AAGATGATCA AGCTTACCGA TGTATCTATC AAGACATAGA CTCTGATGAA AAGCAAGGGG TGTCGATAAC CAAAGATGTA ATCAGCGTTG CTGGAGATAT GCTGAAGATG AATCTAACTT CTCTGGGACC TTTGGTATTA CCTTACCTAG AGCAATTCCA ATATGTGATA CGACAGATTC TTTGCAAGAA ACTAAAGATC TATGAGTCGA GTTCTTCTTA TACACCAAAC TTCAAGACAG CGTTTGAGCA TTTCTGCATT CATACAGGAG GAAGAGCTGT TATTCAAGCA ATGGAGATGA ACCTGAACTT GACAAAAGTA GACATCGAGC CATCAAAGAT GACTCTTCAT AGGTTTGGGA ATACTTCTTC GTCATCCATT TGGTACGCTC TCTCTTACTT GGAAGCAAAA AGGAGAATGA AAAAAGGCGA TAGGGTCTTG CAGATTGCAT TTGGAAGTGG GTTCAAGTGT AACAGTGCGG TGTGGAGATG CATCCGAGAA GTGGAGCCCA ATACAGAAAA CAAATGGCTC GACTTTATCG ACTCATATCC TGTAGACGTA CCTGACTCTA CGAATATCAG AACAGGCTAG
Length1380
Protein Sequence
Protein Residue
Map Locationscaffold_8: 11865228.. 11866607
Download Sequence
A.thaliana
AGI-codeAT5G49070.1
Description3-ketoacyl-CoA synthase 21
TAIR curator summaryEncodes KCS21, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).
Alias[KCS21][3-ketoacyl-CoA synthase 21]
Gene coexpression
MR
MR Locus Description
9.48683 Virus1898
12 Ahg487619 synaptosomal-associated protein SNAP25-like 29
18.8414 Ahg911122 Endosomal targeting BRO1-like domain-containing protein
27.2029 Ahg921584
28.178 Ahg487592 glycine-rich protein 19
32.909 Ahg936262
34.9428 Virus3371
40.9878 Ahg344248
48.5798 Ahg932838 formin 8
53.963 Virus3098
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression