Detail



ID : Ahg495217

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|495217|fgenesh2_kg.8__1033__AT5G51451.1
Sequence
CGAGGTTTAA ATGTCCTTTT CCTTTTGTAG TTTCTTTCTC TCTTTTTGAC TCATCTTTGG CTTTTCCCAT GAGCTTTTCC AGCACATTCA TCTGGATTGA TTAAAAATAC ACTTGTTTAT TCTGGGGTTT AATTCTTACT TTCAAATACT TATGTGTGAA CTTACTCTTA TTATATAATG TCTTCTACCT ACTAAGTCCT TTAACGTTTC ATAATCCTCA TAATCGTTAA GCCTTGTGTG ACTGTTTCTG TTCAAATGAG CTCAATCCAT GTTGCTTCTT TCCTTCTCTT GTTTCTCCTC TTGCATCTTG CTGATTCTCG TCACCTCGAC AATGTCCACA TTACAGAGTC TCGGTTTTCG CTTGTCAAGG ATCAAAACGT TGTCTCTGGT TCGACATCTA AAGAACCGGT TAAAGTTTCT CGGTTTGTGC CGGGTGCAGT GAAGCACCAC CATCGTCGTC CACCGCTCTT ATTTGCAGAT TATCCGAAGC CGTCCACTCG GCCTCCACGC CATAACTGAA ACCTCTCT 
Length528
Protein Sequence
Protein Residue
Map Locationscaffold_8: 13686013.. 13686664
Download Sequence
A.thaliana
AGI-codeAT5G51451.1
Description
TAIR curator summaryEncodes a root meristem growth factor (RGF). Belongs to a family of functionally redundant homologous peptides that are secreted, tyrosine-sulfated, and expressed mainly in the stem cell area and the innermost layer of central columella cells. RGFs are required for maintenance of the root stem cell niche and transit amplifying cell proliferation. Members of this family include: At5g60810 (RGF1), At1g13620 (RGF2), At2g04025 (RGF3), At3g30350 (RGF4), At5g51451 (RGF5), At4g16515 (RGF6), At3g02240 (RGF7), At2g03830 (RGF8) and At5g64770 (RGF9).
Alias[CLEL7][GLV10][RGF5][CLE-like7][GOLVEN 10][root meristem growth factor 5]
Gene coexpression
MR
MR Locus Description
12 Ahg921469 Peroxidase superfamily protein
18 Ahg328678 Barwin-related endoglucanase
41.8927 Ahg944023
42.0951 Ahg918157 RING/U-box superfamily protein
42.2374 Ahg937228
42.8486 Virus0998
45.7493 Ahg928674
55.9643 Virus1570
58.4466 Ahg929321
60.9918 Ahg901205 FBD-like domain family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression