Detail



ID : Ahg495306

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|495306|fgenesh2_kg.8__1122__AT5G52380.1
Sequence
CAAAGAAACT TGTGTCTTCT TCTTCGTCTT CACTGCCTCC ATCGCCGCCG GCGAAATCAA TCGTATTTCT CTGAATACAG TGGTCGACCA TGGTGAACCA AAGGCGAAGA CTTGCGCAGA AGAGATACAA GGAAGCTAAT CCAGAGCTGT TTCCAAAAGC AGAACCAACA CCACCAAAGG ACCCTAATAA GAAGAAGAAG AAGAAGAGCT TGTTCAAGAA AAAGAAACCT GGATCTTCCA CTGATAGACC TCAGAGAAAA GGCTCGTCGA CGAGACATCC TCTTCGAGTT CCTGGTATGA AACCTGGAGA AGGCTGTTTT ATCTGCCACT CCAAAACCCA TATTGCTAAG CTCTGTCCTG AAAAATCTGA GTGGGAGAGA AACAAGATAT GCTTGCAATG TAGGAGGAGA GGGCATAGTC TTAAAAACTG CCCTGAAAAG AACGATGAGA GCTCCGAGAA GAAGCTCTGT TACAATTGTG GAGATACTGG CCATTCACTT TCCCATTGTC CTTACCCTTT GGAAGATGGA GGGACCAAAT TTGCAAGTTG TTTCATTTGC AAAGGACAGG GGCACATAAG CAAGAACTGT CCTCAAAACA AGCATGGAAT CTACCCAATG GGCGGGTGTT GTAAAGTGTG TGGGAGTGTG GCGCATCTCG TCAAAGACTG TCCCGATAAA TTCAACCAAG AGTCAGCCCA ACCAAAGAAG ACTTCAAGAT TTGATGCTAC ACCAAGAGGA AAGGTCACTA AGTTAAGTGG GGACGATCTT GAGGACGATT TCACTGAAGA GCCCAAAAGC AGCAAGAAGA TCAATATCTC TGATGATTCG GATCAGAAGA GTGTCGAGGT GAAGAAAAAG AAACAAGGTC CAAAGATTGT CAATTTCGTT GGATGATCAC AAGAGGATCT AAAAGGGTCA TCAATTTTGT AGGAAATATC AAAATTCAGA ACAATGCTGC TATGTAATGG AACAAGACAG CCAAATTCTT TTTCAGATAA GCTTCTAAAC CG 
Length1012
Protein Sequence
Protein Residue
Map Locationscaffold_8: 14189245.. 14191047
Download Sequence
A.thaliana
AGI-codeAT5G52380.1
DescriptionVASCULAR-RELATED NAC-DOMAIN 6
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
19.4936 Ahg491436 La protein 1
22.5167 Ahg487833 RNase L inhibitor protein-related
24.1039 Ahg480841 Transducin/WD40 repeat-like superfamily protein
37.7889 Ahg907940 ARM repeat superfamily protein
47.2758 Ahg477645 H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 protein
49.2849 Ahg488399 Transducin/WD40 repeat-like superfamily protein
56.4978 Ahg486635 Pentatricopeptide repeat (PPR) superfamily protein
56.5685 Ahg941736 P-loop containing nucleoside triphosphate hydrolases superfamily protein
58.0689 Ahg483634 Translation elongation factor EFG/EF2 protein
58.3952 Ahg496396 DEAD box RNA helicase (PRH75)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression