| Annotation |
|---|
| Description | jgi|Araly1|495317|fgenesh2_kg.8__1133__AT5G52470.1 |
| Sequence |
AAAATCCGCC ACCACCGCAC ATCTCTTTCC TTTGCCTTCG TTTTTTTCGG TTCTCGTCTT TCGTTCTTCA CTTTTAACTC GCAAATATGA GACCACCACT TACAGGAGGA CGTGGTGGTG GAGGATTCAG AGGAGGAAGA GATGGTGGTG GAAGAGGTTT TGGAGGTGGA AGAAGCTTTG GAGGAGGGCG TGGCGACAGA GGACGTGGTG GTCCTCGCGG CAGAGGACGT GGTGCGCCTC GTGGAAGAGG AGGACCACCA CGTGGAGGAA TGAAAGGAGG AAGCAAAGTG CTTGTTGAGC CTCACAGACA CGCAGGAGTG TTTATTGCTA AGGGTAAAGA AGATGCTCTT GTTACTAAGA ATTTGGTTCC TGGTGAAGCT GTTTACAATG AGAAGAGGAT CTCTGTTCAG AATGAAGATG GAACTAAGAT TGAATACAGA GTTTGGAATC CTTTTAGATC TAAGTTAGCT GCTGCAATTC TTGGTGGTGT TGATAACATT TGGATCAAAC CTGGTGCTAA AGTTCTTTAC TTGGGTGCTG CTTCTGGAAC CACTGTCTCT CATGTTTCTG ACCTTGTTGG CCCTGAGGGA TGTGTTTATG CTGTTGAGTT TTCTCATAGA AGTGGTAGAG ATTTGGTGAA CATGGCAAAG AAGAGAACTA ATGTTATTCC AATCATCGAA GATGCTAGAC ACCCTGCTAA GTACAGAATG CTTGTGGGCA TGGTTGATGT CATATTCTCT GATGTTGCTC AGCCAGATCA GGCAAGAATC TTGGGCCTCA ATGCCTCATT TTTCCTCAAA ACTGGTGGAC ACTTTGTTAT CTCAATCAAG GCCAACTGTA TCGACTCTAC GGTTGCAGCA GAAGCAGTGT TCCAGAGTGA GGTGAAGAAG CTGCAACAGG AGCAGTTTAA GCCAGCAGAA CAGGTGACTC TAGAGCCGTT TGAGCGTGAC CATGCCTGTG TTGTTGGTGG TTACCGCATG CCTAAGAAAC AAAAGGCTCC AGCCACATAG AGCAACTGTG GACAGTATCT CGTTACTTAT TGTATTAAGT TAGAGATGGA TAATGCTTTT ATGTCTCGTT TGGAATGCAA CATTTTCGTC CAAT |
| Length | 1104 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_8: 14246153.. 14246907 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G52470.1 |
| Description | fibrillarin 1 |
| TAIR curator summary | encodes a fibrillarin, a key nucleolar protein in eukaryotes which associates with box C/D small nucleolar RNAs (snoRNAs) directing 2'-O-ribose methylation of the rRNA. This gene also encodes a novel box C/D snoRNA, U60.1f in its fifth intron that accumulates in seedlings and that their targeted residue on the 25 S rRNA is methylated. |
| Alias | [ATFBR1][ATFIB1][FBR1][FIB1][SKIP7][FIBRILLARIN 1][fibrillarin 1][SKP1/ASK1-INTERACTING PROTEIN] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 8.30662 |
Ahg474037 | nucleolin like 1 |
| 12.4097 |
Ahg486159 | homologue of NAP57 |
| 15.8114 |
Ahg487031 | RNA-binding (RRM/RBD/RNP motifs) family protein |
| 19.4936 |
Ahg928364 | |
| 21.3542 |
Ahg470457 | Nucleolar GTP-binding protein |
| 23.7487 |
Ahg492088 | Ribosomal protein L14 |
| 27.7489 |
Ahg939120 | Ribosomal protein S13/S15 |
| 30.0998 |
Ahg470083 | SET domain-containing protein |
| 30.9677 |
Ahg319762 | Translation elongation factor EF1B/ribosomal protein S6 family protein |
| 31.9844 |
Ahg496177 | GTP binding Elongation factor Tu family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|