| Annotation |
|---|
| Description | jgi|Araly1|495327|fgenesh2_kg.8__1143__AT5G52560.1 |
| Sequence |
TTCCCAGTTT TATCTCAAAC TCTCTCTCTG TCGTCCTGAT CGATCTCCCA AATCTCAAAT TCGGAACAAA ACACATAATT TGGTTCGGTC TTCTTCTTCA ATTTTCACCG ACAGAAACCC GTCTTTTCCT CTTCTCTCTC TCATTTCTAT CAATTTTCTC GACAATTCCC CAGTCGTCGA AGAAGCTACA GCTTGCAATT TGCTCGTGTT CTCTTCCATC GTTCCAAAAA GCCTTTTCAT GGCTTCCACG GTTGATTCCA ATATCTTCTC ATCCGTCCCA GCTCTTCAGA GAAACCTCGG AATTTTGTCT CCTGATCAGA TCGAATTGGC GAAGATCTTA TTGGAAAATG GTCAGAGTCA TCTCTTCCAG CAATGGCCTC AACTTGGCGT TGATGACAAA CAGAAACTAG ATTTTTTCGA TCAGATTGCT CGCTTAAATT CAAGTTATCC TGGGGGTTTA GCGGCATACA TTAAGACTGC GAAAGAGCTT CTCGCTGATT CGAAATTAGG GAAGAACCCA TATGATGGTT TCTCTCCTTC TGTTCCTTCA GGAGAAAATC TTACTTTTGG TAATGAGAAC TTCATCGAAA TGGAAAAAAG AGGTGTCGTC GAAGCTAGGA ATGCCGCTTT TGTTCTTGTT GCTGGTGGTC TTGGCGAGCG TCTTGGTTAC AATGGAATCA AGGTGGCACT TCCAAGAGAG ACAACTACTG GGATATGCTT CTTGCAGCAC TACATTGAAT CTATATTGGC TCTTCAAGAA GCTAGCAACA AGATCGCTTC TGATGAAAGT CAGAGAGACA TTCCTTTCAT TATTATGACA TCTGATGATA CACATTCACG TACACTGGAG CTATTAGAGT TAAACTCTTA TTTTGGGATG AAACCTACTC AAGTACATCT TTTAAAACAG GAAAAAGTTG CATGTCTTGA TGATAATGAC GCCAGGCTTG CATTAGACCC CCACAACAAA TACAGTATCC AGACAAAACC TCATGGACAT GGCGATGTAC ATTCACTTCT ATATTCCAGT GGCCTTCTTC ATAAATGGCT TGGTGCTGGT TTAAAATGGG TTTTGTTTTT CCAAGATACA AATGGTCTTC TCTTCAATGC AATTCCAGCT TCTTTGGGTG TGAGTGCTAC CAAACAGTAT CATGTTAACT CTCTTGCTGT TCCCCGTAAG GCGAAGGAAG CTATTGGAGG AATTACTAAA CTTACTCACG TTGATGGCAG ATCTATGGTA ATCAATGTGG AGTACAATCA ACTTGATCCT CTACTTAGAG CATCTGGATT CCCTGATGGA GATGTTAATT GTGAGACAGG CTTTTCGCCA TTCCCGGGAA ATATTAATCA ATTGATTCTG GAACTTGGTC CCTACAAAGA CGAGTTGCAA AAAACTGGAG GGGCCATCAA AGAGTTTGTT AATCCAAAAT ACAAGGATAG CACCAAAACA GCGTTTAAAT CTTCAACTCG TCTAGAGTGT ATGATGCAAG ATTATCCAAA GACATTGCCT CCAACTGCAC GAGTTGGATT CACGGTGATG GATATATGGC TTGCTTATGC ACCCGTCAAG AATAATCCTG AGGATGCTGC TAAGGTACCT AAGGGAAATC CATATCACAG TGCAACTTCT GGAGAAATGG CGATTTATCG TGCTAACAGC CTCATTCTTC AAAAGGCTGG TGTCAAAGTG GAAGAGCCTG TAAAGCAGGT CTTGAATGGC CAAGAGGTTG AAGTATGGTC TCGTATCACA TGGAAACCCA AATGGGGAAT GATCTTCTCT GATATCAAAA AGAAAGTCAG CGGGAACTGC GAGGTCTCTC AGAGATCCAC AATGGCAATC AAGGGTCGTA ATGTTTTTAT TGAAGATCTC TCCTTGGACG GTGCTCTTAT TGTAGATTCC ATTGATGAAG CAGAGGTTAA ACTTGGAGGT TTGATAAAGA ACAATGGTTG GACCATGGAG AGTGTAGATT ACAAGGACAC ATCGGTTCCA GAAGAAATAA GAATCAGAGG TTTCAGATTC AACAAAGTGG AGCAACTCGA AAAGAATTTC ACTCAACCTG GAAAATTTTC TGTGGAAGAT TGAAGTTATC TTTGTGACAC TTTGGAAAAG TGTTATTTGG CAATATGATT AATTAGCAAA TTATCTATTT TTTTAAATGC CAAATGATCC ATTTGTCCTT CTAATGGAGG GCTTAATTCT TTCTTT |
| Length | 2206 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_8: 14292786.. 14297126 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G52560.1 |
| Description | UDP-sugar pyrophosphorylase |
| TAIR curator summary | Encodes a protein with UTP:sugar 1-phosphate uridylyltransferase activity, which has been shown to use a wide range of substrates including glucose-1-P, galactose-1-P, xylose-1-P, arabinose-1-P and glucuronate-1-P. The enzyme was shown to require Mg2+ or Mn2+ for activity. Mutations in USP can lead to a complete loss of male fertility. |
| Alias | [ATUSP][USP][UDP-sugar pyrophosphorylase] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 6 |
Ahg475227 | |
| 6.9282 |
Ahg472739 | Vesicle transport v-SNARE family protein |
| 7.74597 |
Ahg901754 | ENTH/VHS/GAT family protein |
| 13.2665 |
Ahg471140 | dynamin-like protein 6 |
| 16.2481 |
Ahg486577 | peroxin 11E |
| 16.3095 |
Ahg477486 | general regulatory factor 7 |
| 18.8149 |
Ahg490994 | Ribosomal protein L12 family protein |
| 19.5959 |
Ahg490504 | RNAhelicase-like 8 |
| 19.975 |
Ahg478469 | Duplicated homeodomain-like superfamily protein |
| 20.445 |
Ahg481432 | Protein of unknown function (DUF810) |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|