| Annotation |
|---|
| Description | jgi|Araly1|495374|fgenesh2_kg.8__1190__AT5G53060.1 |
| Sequence |
TTTTTGCATT GCACCGATTC ACCTCCATCG ATTTTGGATA TTTTCGAATT CACCCTCCAA GATTTCCCTT GAAATTGACT GGAAAGTTTC TTCCTTTTTC GATTTCCGGT AAAAAGGAAA GTAATTGGGC ACTGTAGACT TCCTTCTAGG GTCTTTGTGA ACTTTCTAAT CCTTTAGAAA AACCCTCGAA TTCGAAAATT TTGCGGCGAG ATTGATAAAT GACTAGTTAA GATTGAACTT TGATTTCTGG GTTTGCGATG GAGAGATCTA GATCGAAGAG AAACTACCAC TATGACCAAG ACTATGATGG AGATTCTATG CCCAGGTCTA AACCTCGCTA CAACAATAAT TACCACTTTG GTGGCGGCGG AGGAGGAGGA AATAACAGAT ACCGTGGCGG CGGTGGTGGT GGTGGTGGAA ATGGCCGGCC ATCGAAGTCT CACCCTGAAA CGATGGCAAC GACGACTTAT CGAATCCTCT GTCATGACGC TAAAGCAGGA GGCGTCATTG GTAAATCCGG GACAATCATC AAATCGATTA GGCAACACAC CGGCGCGTGG ATTAACGTGC ATGAGCTAGT TCCTGGAGAC GCAGAGCGTA TCATTGAGAT TTCTGACAAT CGTAGGCGTG ACCCTGATGG GAGAATGCCG TCATTCTCTC CTGCTCAAGA GGCTTTGTTT AGTGTTCATG ACAGGATTTT GGAGAGTGAA CCTCAGTTTG GGTATGGTGG AGCACAGCCG GAAGAGGAGG AGGATTACGG TGGAGTTAGA CCTGGTGGAG GGAGAGTTGT GACTAGGTTA GTGGTTTCTA GGATGCATGT TGGTTGTTTG TTGGGTAAAG GTGGGAAGAT TATTGAGCAG ATGAGGATTG AAACTAAGAC TCATATTCGG ATTCTGCCAC GGGAAAGTAA CTTACCTCGT TGTGTTTCAC TCTCTGAAGA GATTGTTCAG ATTGTAGGTG AACTTAGTGC AGTGAAAAAC GCTTTACTCA TTGTATCATC GCGTCTAAGG GAGAGTCAAC ATCGTGATCG GAGTAATTTC CAAGGGCGTT CACATTCACC AGAGCGGCAG TTTGCAGCTG CTGGGGATGA TTACATCCCA CAGAGAAGAC AATCATCAGA TAGGTTTCCT CGTGGTAATT ATAGAAATAA CAACTTCAGT TCTCGCCAAT CCAACTATGC TGAAGAAGCT CCAGCAGTTC CAGTTGGTGA GAATGTCTAC ACCGAAGAGC TTGTGTTCCA GATTCTCTGC CCAGCTGACA AGATTGTTCG GGTTATTGGG GAATCGCAAG GAATATTAGA TTTGCTTCAA AATGAGATTG GCGTGGACGT GAGAGTATCT GACCCAGTTG CTGGATCTGA TGAACAGATA ATCACCATTT CTTCGGAAGA GGCTCCTGAT GATCCATTTT TCCCTGCTCA AGAAGCCTTG TTGCACATTC AAACTCAGAT CATAGATCTT ATTCCGGATA AAGATAATTT AATAACAACG AGATTACTTG TCTCATCTAG AGACTCCGTA TGTTTGGAAG GGAAAGCAGG ATCAGTATCT GAGATATCAC GATTAACTGG AACAAGCGTA CAAATTCTAG CTAGGGAAGA AATTCCCCGA TGTGCTTCTA TCAATAATGT TGTTATACAG ATTACTGGCG ATATCAGAGC AGCTCGGGAT GCACTTGTTG AATTAACGTT ACTATTGAGG AGTCATATGT TCAAGGAGCT CTCTCAAAAG GAGACACCAC CAGCTTCCAC ATCCACAACT GGCCCTCTTG AAGGTGTTGC AGGAGTAATG GAGGTAGCTT CATCAAATAA CACAATTCAA TCCCGTGAAG GTCTTACTGG TTTGAATCTG AACTTGCAGC AAGCTAGCAC AATCTTGCCA CAGTTTAAGG AAGGTTTTGG ATCAGTTGCA AAGGCGGGTG AAAGTGAACA CCGGGAGGAG GTTCCTGTCA CGACAAGCAG AATGGCAGTG CCACTTGTTA CTAGGAGCAC TCTTGAAGTT GTCTTACCAG AGGCTGTTGT TCCTAAGCTT GTTACGAAAT CAAGAAACAA GCTTGCACAA ATCAGTGAGT GGTCTGGAGC TAGTGTAACC TTAGTTGAAG ACCGACCAGA AGAAACACAG AATATCATTC GAATTTCGGG TACACCCGAG CAGGCAGAGA GAGCACAGAG CTTGCTTCAA GGCTTCATCT TGAGCATACA AGAAGATGGA CCGTGAACTT GGACCAGATC ACCGGTCAAC ACAGAGAAGA AGATCAAGAA ACTGAGAAAT GTGGAGTTAT GTATGAATTG TTGAATATTA GGATTTAAGT GGGCAGTAGT AGTTTTAGAT GAACATTCTA CATTTTGACC ATCACTCTTT GGTTTCTACT TTCTATGTTG TCTATTAGTC TTCTTTGTTT ACATTGTTCT GTAACTTAT |
| Length | 2419 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_8: 14555338.. 14558680 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G53060.1 |
| Description | RNA-binding KH domain-containing protein |
| TAIR curator summary | |
| Alias | [RCF3][SHI1][regulator of CBF gene expression 3][SHINY 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1.41421 |
Ahg493298 | Cysteine proteinases superfamily protein |
| 1.41421 |
Ahg471021 | Metallopeptidase M24 family protein |
| 5.2915 |
Ahg470396 | |
| 8.7178 |
Ahg477157 | Protein kinase superfamily protein |
| 10.0995 |
Ahg890387 | Kinase-related protein of unknown function (DUF1296) |
| 10.9545 |
Ahg924847 | phosphoinositide binding |
| 12.9615 |
Ahg357572 | |
| 12.9615 |
Ahg923615 | ARM repeat superfamily protein |
| 16.6132 |
Ahg323324 | RNA helicase, ATP-dependent, SK12/DOB1 protein |
| 19.6214 |
Ahg941736 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|