Detail



ID : Ahg495511

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|495511|fgenesh2_kg.8__1327__AT5G54260.1
Sequence
TTTACTGAGC TGCAAACACT TGCCATCATG TCTAGGGAGG ATTTTAGTGA TACACTTCGA GTACTTGTTG CAACTGATTG CCACTTGGGT TACATGGAGA AGGATGAAAT AAGGCGGCAT GATTCGTTTA AGGCTTTTGA AGAGATATGT TCTATAGCGG AGGAAAAACA GGTGGACTTC TTACTCCTTG GAGGTGATCT TTTTCATGAG AATAAACCCT CTAGAACTAC GCTAGTTAAA GCCATTGAAA TTCTTCGCCG CCACTGTCTT AATGATAAAC CAGTGCAGTT TCAAGTAGTC AGCGACCAGA CTGTAAATTT TCAAAATGCG TTTGGTCATG TAAATTACGA GGATCCACAC TTCAATGTAG GCTTGCCCGT GTTCAGTATT CATGGAAACC ATGATGATCC AGCCGGAGTG GACAACCTTT CTGCAATTGA TATTCTTTCC GCATGCAACC TTGTGAACTA TTTTGGAAAG ATGGTTCTTG GTGGTTCAGG TGTTGGCCAG ATTTCCCTCT ACCCTATACT TATGAAGAAG GGTTCAACAA CCGTGGCTCT CTATGGTTTA GGAAACATCA GGGATGAACG TCTTAATAGA ATGTTTCAGA CCCCACATGC TGTCCAATGG ATGAGGCCTG AAGTTCAAGA AGGATGTGAT GTTTCTGACT GGTTCAACAT TCTGGTGCTT CATCAAAATA GGGTGAAATC AAACCCCAAA AATGCAATAA GTGAGCACTT TCTTCCACGG TTCCTCGACT TCATTGTGTG GGGCCATGAG CATGAATGCC TTATCGACCC CCAGGAGGTA TCTGGGATGG GCTTCCACAT CACACAACCA GGATCTTCTG TGGCAACATC ACTTATTGAT GGGGAATCAA AGCCAAAACA TGTTCTTCTC TTAGAAATCA AGGGAAATCA ATATCGTCCT ACGAAGATAC CTTTGACATC TGCGAGGCCT TTCGAGTATA CAGAGATTGT TTTAAAGGAT GAAGGTGATA TTGATCCCAA TGATCAAAAC TCAATCCTCG AGCACTTGGA TAAAGTGGTC AGAAATCTAA TAGAGAAAGC CAGCAAAAAT GCTGTTAACA GATCAGAGAT CAAGCTCCCG TTGGTTCGAA TCAAGGTAGA TTACTCAGGA TTTATGACGA TAAATCCTCA AAGGTTTGGA CAGAAATATG TGGGAAAGGT TGCAAATCCC CAGGACATTT TAATATTTTC CAAGGCTTCT AAGAAGGGTC GGAGCGAAGC CAACATCGAT GATTCTGAGC GGCTTCGTCC AGAGGAACTG AACCAGCAGA ATATAGAAGC TTTAGTAGCT GAAAGCAACC TGAAAATGGA GATCCTGCCA GTTAACGATC TGGATGTTGC TCTTCACAAT TTTGTGAACA AGGATGATAA ACTAGCTTTC TACTCATGCG TTCAGTACAA TCTTCAAGAG ACTCGTGGTA AACTTGCAAA GGATTCAGTT GCCCAGAAAT TTGAGGAAGA TGACTTGATT CTTAAAGTGG GAGAGTGCTT AGAGGCAAGA AGATATAAAT TCAGTTACTT TCTGCCGCAT ATTGAACGTT TGAAAGATAG GTCCACTCGA CCCACTGGTT CCTCGCAGTT TTTATCCACA GGATTGACAT CAGAGAATTT GACGAAAAGA AGCAGTGGCA TCGCGGATGC TTCGTTCAGT GATGATGAAG ACACGACTCA GATGTCTGGT TTAGTGCCTG CCACTAGAGG ACGGAGAGGT TCATCCACTG CTAATACATC TCGTGGTAGA GCTAAAGCCC CAACCAGAGG AAGAGGCCGT GGTAAGGCCT CAAGTGCGAT GAAGCAAACC ACTCTTGATG GTTCTCTTGG TTTTCGCCAG TCTCAAAGAT CTGCTTCAGC TGCTGCTTCA GCTTCCTTCA AAAATGCTTC CACCATTGGT GAAGATGATG TAGATTCTCC TTCAAGCGAG GAAGCAGAGC CTGAAGATTT TACCAAACTT GACAGCACTT CGGAGGACGA TGAGAGCACT AAAGGCAAAG GACGTAAAAG ACCAGCTACT ACTAAGAGAG GCAGAGGTAG AGGTTCTGGG ACTTCAAAAC GTGGTAGAAA AAACGAAAGC TCTTCTTCAC TTCATAGGCT ACTCAGTAGC AAAGACAATG ACGATGACGA AGATGATGAA GACATAGAAA AGAAGCTTAA CAAATCTCAG CCTCGGGTTA CAAGGAACTA TGGAGCTCTA AGAAGATAAA TCCACATCAC AACGAAGCTT CATTTTTCTG TTATTTTCTA GCGACCTCTC AAGCGAAACA ACTTCTGAAG AAGAGAAATT AGTCTAACAA GAGTTTTTTG AGCTGTACAG AGAATTTCGT AGTGTTCTTT TATTTTCTTG CTCTTTTTAA AGTTTTGTTG TTGATGAATG CGGCAATATG ATTACTCGTC AGTAAGAAGT CTAAAACTGT AGTAACC 
Length2447
Protein Sequence
Protein Residue
Map Locationscaffold_8: 15078518.. 15416831
Download Sequence
A.thaliana
AGI-codeAT5G54260.1
DescriptionDNA repair and meiosis protein (Mre11)
TAIR curator summaryDNA repair and meiotic recombination protein, component of MRE11 complex with RAD50 and NBS1
Alias[ATMRE11][MRE11][ARABIDOPSIS MEIOTIC RECOMBINATION 11][MEIOTIC RECOMBINATION 11]
Gene coexpression
MR
MR Locus Description
8 Ahg920571 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
9.94987 Ahg483764 golgin candidate 4
13.8924 Ahg919361 Polynucleotidyl transferase, ribonuclease H-like superfamily protein
20.7846 Ahg921381 MAK16 protein-related
31.1127 Ahg357183
33.541 Ahg473323 Arp2/3 complex, 34 kD subunit p34-Arc
42.3556 Ahg914728 CBS domain-containing protein / transporter associated domain-containing protein
43.8178 Ahg486427 diphthamide synthesis DPH2 family protein
55.1543 Ahg357880 signal recognition particle 19 kDa protein, putative / SRP19, putative
58.515 Ahg475997 ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression