| Annotation |
|---|
| Description | jgi|Araly1|495550|fgenesh2_kg.8__1366__AT5G54690.1 |
| Sequence |
ACATCCATCT CCTTTCAGAC AAAAAAAAAA ACACATAATC AGAAAACAAA GACATAATAA ATAAAGAAAC AGAGGAGAAA CAGAGAGATC ATGCAGTTGC ATATATCTCC GAGCTTGAGA CATGTGACTG TGGTCACAGG GAAAGGATTG AGAGAGTTCA TAAAAGTGAA AGTTGGTTCT AGAAGATTTT CTTATCAAAT GATGTTTTAT TCTCTACTCT TCTTCACTTT TCTTCTCCGA TTCGTCTTTG TTCTCTCCAC CGTTGATACT ATCGACGGCG ATCCCTCTCC TTGCTCCTCT CTTGCTTGCT TGGGGAAGAG ACTAAAGCCA CAACTTTTAG GAAGAAGGGT TGATTCTGGT AATGTTCCTG AAGCTATGTA TCAAGTTTTA GAACAGCCTT TAAGCGAACA AGAACTCAAA GGAAGATCAG ATATACCTCA AACACTTCAA GATTTCATGT CTGAAGTCAA AAGAAGTAAA TCAGACGCAA GAGAATTTGC TCAAAAGCTA AAAGAAATGG TGACATTGAT GGAACAGAGA ACAAGAACGG CTAAGATACA AGAGTATTTA TATCGACACG TCGCATCAAG CAGCATACCG AAACAACTTC ACTGTTTAGC TCTTAAACTA GCCAACGAAC ATTCGATAAA CGCAGCTGCG CGTCTCCAGC TTCCAGAAGC TGAGCTAGTC CCAATGTTAG TAGACAACAA CTACTTTCAC TTTGTATTGG CATCAGACAA TATTCTTGCA GCTTCGGTCG TGGCTAAGTC ATTGGTTCAA AACGCTTTAA GACCTCATAA GATCGTTCTT CACATCATAA CGGATAGGAA AACTTATTTC CCAATGCAAG CTTGGTTCTC ATTGCATCCT CTGTCTCCAG CAATAATTGA GGTCAAGGCT TTGCATCATT TCGATTGGTT ATCGAAAGGG AAAGTTCCCG TTTTGGAAGC TATGGAGAAA GATCAGAGAG TGAGGTCTCA ATTCAGAGGC GGATCATCAG TTATTGTGGC TAATAACAAC GAGAATCCGG TTGTTGTTGC TGCTAAGTTA CAAGCTCTTA GCCCTAAATA CAACTCCTTG ATGAATCACA TCCGTATTCA TCTACCAGAG TTGTTCCCGA GCCTAAACAA GGTTGTGTTT CTAGACGATG ACATTGTGAT CCAAACTGAT CTTTCACCTC TCTGGGACAT TGACATGAAT GGGAAAGTAA ATGGTGCAGT AGAGACATGT CGAGGAGAAG ACAAGTTTGT GATGTCAAAG AAGTTCAAGA GTTACCTCAA CTTCTCAAAT CCAACAATTG CCAGAAACTT CGATCCAGAG GAATGTGCTT GGGCTTATGG AATGAATGTT TTCGACCTAG CGGCTTGGAG GAGGACTAAC ATAAGCTCCA CTTACTATCA TTGGCTTGAC GAGAACTTAA AATCAGACCT GAGTTTGTGG CAACTGGGAA CTTTGCCTCC CGGGTTGATA GCTTTCCACG GCCATGTCCA AACCATAGAT CCGTTCTGGC ATATGCTTGG TCTCGGATAC CAAGAAACCA CGAGCTATGC TGATGCTGAA AGCGCCGCCG TTGTTCATTT CAATGGAAGA GCTAAGCCTT GGCTGGATAT AGCATTTCCT CATCTACGTC CTCTCTGGGC TAAGTATCTT GATTCCTCTG ACAGGTTCAT CAAGAGCTGT CACATTAGAA CATCAAGATA ATCACAAACC AAAACCCATT TTCTACACTG GCACCCAGAG AGGAGATTCA CAGATCAAAA TATAGGATCA AACTTTTCTG CAATGGAGTT TCACTTCTCT ACCGGATCAT GTTTTGCCGT CTCTCCAGTC TCTCATGTTT CTAATTTTTT TGTACTTTCA AACTCTTATG GCGAGAAAGT AACCCCATTC TATGTATTAA TGTACGAACA CATAAAGTG |
| Length | 1919 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_8: 15700753.. 15703336 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G54690.1 |
| Description | galacturonosyltransferase 12 |
| TAIR curator summary | Encodes a protein with putative galacturonosyltransferase activity. Mutants defective in this gene displayed a notable reduction in xylose (>50%) in the cell walls from stems and roots and a reduction in cellulose (~25%). |
| Alias | [GAUT12][IRX8][LGT6][galacturonosyltransferase 12][IRREGULAR XYLEM 8] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 13.7113 |
Ahg332123 | ovate family protein 3 |
| 41.6893 |
Ahg945309 | Protein of unknown function (DUF1218) |
| 71.5681 |
Ahg916117 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| 74.2294 |
Ahg493584 | |
| 95.247 |
Ahg926932 | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|