Detail



ID : Ahg495586

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|495586|fgenesh2_kg.8__1402__AT5G55040.2
Sequence
AGAAAGTTGC AGAGAGAGAG AGACCTTAGC TGTAGAGAGA GAAAGGGATT GGGTGTTGTG CACTGAGTTC GATAGAGAAG AAGATGAGTC AGATCGCGAG ACGGCGGAGG AAAGGTCGAC CGTCGAAGGC GGATCTGGCG GCGCGGCGTA GTAGTTCATC ACCGGGTGAA TCGGGATATG AGCTCCGGCG AGGTCAAAGG CAGCGAAATG TGAGGTATAA CTTCGATTTC GACGATTACT TCGACGAGGA GGAAGAGGAT GATGTTGAAG AGGAGAGGAA GAGGCAGAAG AAGCTGAAAC AAGTTCTTAA ACTGAACCAG AGCCGTGCTA GAGCTGACCC TCCGATTAAG AGTCGAGCGC GTGTGAGACA CGCGTCTGAT TATGAAGAAG AAGAAGAAGA AGATGATGAG GATGATGAAG CAGAGGAGGA CGAGGAAGAT GTGAGTGAGA AGAGGCAAGT GAAGAAGAGG AAAATTAACC GTCACGACGA CGAAGATGAA GAAGAAGAGA AGGATTACGA TGTGGAAGAG AAAGAGGAAG AAGAAGCTGA TTCTGAGGAA GATGATGATA AGGAAAGGAA GAGGAGGAGT GCTTCTGGGA CTCAGTGTGA TCATTCTTCA GAAACAACAC CTATCCTTGA CAAGAAGTCT TTGGAGTTGA TTCTTGACAA ACTTCAGAAG AAAGACATTT ATGGTGTGTA TGCAGAACCG GTTGATCCTG AAGAGCTTCC TGATTATCAT GAGATGATAG AGCATCCCAT GGATTTTTCC ACTGTGAGAA AGAAGCTTGC AAATGGATCA TATTCTACAT TGGAAGAGCT TGAGAGCGAT GTCTTATTGA TTTGCTCAAA TGCGATGCAA TACAATTCCT CAGACACTGT GTACTATAAA CAGGCAAGGA CTATTCAGGA AATGGGGAAG AGGAAGTTTG ACAAGGCAAG AATTAAGATT AAACGTGCTG AGAAAGAGCT TAAAACAGAT GAAAAGGTGA AACCTGTCAG CTCTGTGAAG AAGCAAGTGA GACAGCCATT CAGTCGAAAT GGACTAGAGC CCGTTGGTTC TGATTTCTCC TTTGGTGCAA ACCTTGCAAG TGGAGGAGCT TCTCAAAATG AACCTGTTTC AACTCAAACT GGCGGACATG AAAAGCACAG CTGTACGGAT GTGTTTTTTG AGGGAAATAC ATCCATAGTA GACAATCTGG AGAAAGCAGA AGACTTGTCA TCCGGAAAGG GTCTTGTTGG TAAGTGTGGG AGGAAGCTGT CGGTTGTTGA GGAAGACCGC CGTGCAACCT ATGAAAATTC TGATCAGCAG GCCGATAGAT CGGAGTCCAT ATTCACAACA TTTGAGAGTG AAACCAAGCA GTTTGTTGCT GTAGGGCTTC ATGCAGAACA TGCGTATGGT AGGAGCCTTG CACGTTTTGC TGCTACTCTT GGACCCGTTG CATGGAAAAT AGCTTCTCAG CGAATTGAGC AAGCACTTCC TGCAGACTTT AAGTTTGGTC GGGGATGGGT TGGAGAATAC GAGCCGCTTC CTACGCCAGT ACTTCTATTT GAAACCTACA CACCTAAAGA ACCACCTAAA AAAGCATCTG TCTTTTCAAA GCCAAAATCA AATGCTGCTG CAAAGAAGAA TGAGACACTG TTTAAGACTC CTCTGCCCGT AAAGGAACAA CAGGGTAACA GACCCGTTCG AGATGGAAAC CGTGCATTCC CATTTCCAAC ATCTATTGGG GCTTCGTTAG AAGGGAGTCC TTCTTTTGTT GCTACTCAAG TAGGAAACCT AAAATCTATG AGCCAGCATG AATATCGGAA TCCTTCTCCG CTAGATTTTG TCAAGTCTCA AAATAGGATT CCTCAGCAAG TAGAACTGAA TTTGCCCCCA CCAGCAGAAC AATCCAATTC TGGTTCTACT TGTGTTTCGG AAAACCGTAG CTTTGGAAAA TCAGATACAG TGGCATCATA CAGGTCATCA AGTGACATGA TGAGGAACAT GACTTCTAAA GATTCTGAAC ATTACAAGCA TCAGATGACT ACTAACGGGA TCTTCCCTGG TGGATTGAGT AATGGCAAAG ACTCTCCCGG TGTGAACAGC AGAATGTTTG ATCTATCTAC TGATTTTGCT AATCAAATGA GTCGCACAGC AACAAGTTCA CAACAACCCA TGAGACAACA GAGTCAAAGC CACGGCGAAC AAGCACAGTT AATGAGAAAC TTCAATGAGA AGGCTAGAAC ACAGCACAAC TCCACTTATA ATCATCCTAA AGCTGATGCT ACACCTAATC TCTCGTCACC ACAATCCGCA AGAAGTGAAG ATTCGAGCAA TGCTTCTGTA GCAGCTGCAA GAGCATGGAT GTCGATAGGA GCTGGAGGGA ATAATAAACA AACATTTGAA AATCCTACTA ATCCGAGGAG CAGCCACATT TCTGCGGAGT CCTTGTATAA TCCGTCAAGG GAACAACTTC ACCAACAAGC TTTCAAACCA AGAGACCCCG AAGAGACACA GTTCCATCCT CAAAGGAATG GTTTCCCTTT CCAGACATTT GTGCACCAGC CTGTTCACGG GATGATGAAT GTAGGATCAC AACCATTTCA GAACAACCGA CCGATTGTTT TTCCTCAGAT GGCTGCTCCA ACTTCTGATT TCACAAGATT CCATGTCCAG TCTCCATGGC GAGGAGGCAT TACTCCACAA GTCCAGTTGA AGCAGAGACA AGAGAATCTC AATCTCCCAC CAGATTTGAA CATCGGAGTT CATTCGCCTG ATTCTCCTGC AAAACAATCT TCTGGTGTTC GTGTCGATTC CCAACAGCCT GATTTGGCGC TACAGCTCTA AAAAAACAGC CATGAAGAAA ACCCAAGCAA ATGATACCGC CTCAGCCTTT TCTGTTTTCT GTGCTCATCA TTACATCAGG CGATAAAGCG GGCTGGATAT GTAATTGATC GCTGTGGTAT CAAAACGGAA ACAAACATAA GGTTCGAGGT TCAGGCTGGT TAGAGTCATC AGCCATCAGT ATAGTTGGTC TAAGAGTTAA AATTTGGAGA TTTTTATTGA TATCGACACC CCGGTTAGCT AACTATGTTC CTAACGTAGA TGTTTCATCA AACCAATCCA AGTTCTTGAT TCACCTGATT CCCTGAAGTC TTTGGTCTTC CTACACTTCT CTTTTTGTTA TATAATATAT GAATTAGTAT TATATCATAT GACCATAGTG AAGGTTGTTT GGCCGAGTC 
Length3229
Protein Sequence
Protein Residue
Map Locationscaffold_8: 15840606.. 15845152
Download Sequence
A.thaliana
AGI-codeAT5G55040.1
DescriptionDNA-binding bromodomain-containing protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
9.16515 Ahg492144 DEK domain-containing chromatin associated protein
26.9072 Ahg472338 squamosa promoter binding protein-like 14
31.5278 Ahg480822 heavy metal atpase 4
39.6106 Ahg324764 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein
50.319 Ahg323999 Structural maintenance of chromosomes (SMC) family protein
51.614 Ahg915450 RNA-binding protein
52.2303 Ahg472032 Protein kinase superfamily protein
53.9444 Ahg918814 Heavy metal transport/detoxification superfamily protein
56.5509 Ahg470660 trehalose-phosphatase/synthase 7
62.2093 Ahg929509 ethylene-responsive element binding protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression