Detail


ID : Ahg495661

Blast(Query):  A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|495661|fgenesh2_kg.8__1477__AT5G55760.1
Sequence
GAGAGGCAGA GAAGGTGTTT CCTCTTGTCC AAAAGAGAAG ACAAATCTAA ATGTCTTTAG GTTACGCTGA GAAATTATCC TTCATTGAAG ATGTTGGTCA GGTCGGCATG GCCGAATTCT TCGACCCATC TCATGTTCTA CAATGCAAGA TTGAAGAACT TGCTAAGTTG ATTCAAAAGA GTAAGCATCT AGTAGTCTTT ACTGGTGCAG GCATTTCAAC TTCTTGTGGT ATTCCTGATT TCCGAGGCCC CAAAGGAATT TGGACGCTAC AGCGCGAGGG CAAAGATTTA CCCAAAGCAT CTCTGCCATT TCATCGTGCA ATGCCGAGCA TGACTCATAT GGCTTTGGTT GAATTAGAAA GAGCTGGCAT TTTAAAATTT GTTATCAGTC AGAATGTGGA CGGCTTACAT CTTCGATCTG GAATACCAAG AGAGAAGCTT TCGGAACTGC ATGGAGACTC TTTTATGGAG ATGTGCCCAT CATGTGGAGC AGAGTACCTG CGTGATTTCG AGGTGGAAAC TATTGGATTA AAGGAGACAT CAAGAAGGTG TTCTGTTGAA AAGTGTGGAG CTAAACTTAA AGATACGGTC CTAGACTGGG AGGATGCTTT GCCTCCGAAA GAGATTGATC CAGCAGAGAA GCACTGCAAA ATGGCTGATC TTGTACTTTG TTTGGGTACC AGTTTGCAGA TAACCCCTGC TTGCAATTTG CCTCTCAAGT GTCTCAGAGG TGGAGGCAAG ATCGTGATAG TCAATCTTCA GAAAACCCCG AAGGACAAGA AAGCAAATGT TGTAATTCAT GGTCTTGTTG ATAAGGTGGT TGCAGGGGTC ATGGAATCTC TCAACATGAA GATTCCTCCA TATGTTAGAA TCGATCTTTT CCAGATAATC CTAACTCAAT CCTTAAGCGG AGATCAGAGG TTTATTAATT GGACCCTGCG TGTTGCAAGT GTTCATGGAT TGACTTCTCA GTTACCATTC ATCGAGTCTA TCGAGGTTTC TTTCTCAGAT AACCAGAATT ACAAAGACGC AGTTCTTGAT AAGCAGCCTT TTCTTATGAA AAGGAGAACA GCACGAAACG AAACTTTTGA TATATTCTTC AAAGTTAATT ACAGTGACGG TTGTGACTGT GTCTCCACTC AACTTAGCCT CCCATTTGAA TTCAAGGTTT CAACAGAAGA GCATGAAGAG ATAATTGACA AGGAGGCTGT GCTACAAAGC CTGAGAGAGA AAGCAGTTGA AGAATCCAGT TGCGGGCAAA GCGGTGTGGT TGAGAGAAGA GCGGTTTCTG AACCGAGAAG TGAGGCTGTT GTGTATGCTA CTGTGACCAG TCTCAGGACT TACCATTGTC AACAATCTCT GCTTGCTAAT GGATACCTCA AATGGAAGCT GGAAGGTTCT GGAACGTCCC GTAAACGTTC TAGAACCGGC AAACGAAAAT CAAAGGCACA GGAAGAAGAA TCGAAGGCAT AGGAAAGAAG AAAAGAAAGC TTTTGGTGTA TATAAACAAT AAAACAAACA CTAGTCTAAC CGGAATAGAA AATATGGAAG TTAGTGGCGT TTTGAGGGCT GAGTGAATTT TGTTTTTGGT CCACACTCGG TTCTTTAAAA CCGAAGTTAA CCAGGAATTG AAGGGGATAA T
Length1641
Protein Sequence
Protein Residue
Map Locationscaffold_77: 2523.. 22806
Download Sequence
A.thaliana
AGI-codeAT5G55760.1
Descriptionsirtuin 1
TAIR curator summaryEncodes SRT1, a member of the SIR2 (sirtuin) family HDAC (histone deacetylase) (SRT1/AT5g55760, SRT2/AT5G09230).
Alias[SRT1][sirtuin 1]
Gene coexpression
MR
MR Locus Description
48.0312 Ahg910364 RNA polymerase Rpb7 N-terminal domain-containing protein
58.5747 Ahg946832
66.9627 Ahg357483
73.8106 Ahg491439 hemoglobin 3
85.9767 Ahg319654 transposable element gene
93.0806 Ahg921998 Zinc finger C-x8-C-x5-C-x3-H type family protein
98.3667 Ahg893401 DP-E2F-like 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression