| Annotation |
|---|
| Description | jgi|Araly1|495718|fgenesh2_kg.8__1534__AT5G56280.1 |
| Sequence |
CAAAGAATTC ATCGAAGAGC GAGAGAGACA ACAATGGCAC CTTCGTCATC AAGCGGTTTA ACCTTCAAGT TACATCCTTT GGTAATCGTA AACATATCGG ACCACTACAC TAGGGTCAAA ACTCAGCTCA ATCCTCCTGC TTCAATCTGC GCAAGCGGGC ATGGCTCAAA CAACGGCGAA GCAGTGATCC AGCAAAACCC TAGGGTTTAC GGATGTGTGA TCGGTGTCCA GAGAGGTCGT ACTGTTGAGA TCTTCAACAG TTTCGAGCTT TTATATGATC CTTCGACTCA AACCCTTGAT AGAGCTTTCC TCGAGAAGAA GCAAGAGCTA TATAAGAAGG TGTTCCCTGA TTTCTATATT CTGGGATGGT ACTCTACGGG AAGTGATGCT GAGGAATCTG ATATGCATAT CCATAAAGCT TTGATGGATA TCAATGAATC TCCTGTTTAT GTGCTTTTAA ACCCTGCAAT CAATCACGCA CAGAAGGATC TTCCAGTGAC TATCTATGAA AGTGAATTGC ATGTCATTGA TGGAATCCCG CAGCTGATTT TCGTTCATAC AAGCTACACA ATCGAGACCG TTGAAGCTGA ACGGATATCA GTCGATCATG TTGCACATCT CCAACCATCT GATGGAGGCT CTGCAGCAAC CCAGTTGGCT GCTCATCTTA CTGGTATACA TAGTGCCATC AAGATGCTTA ATAGCAGAAT CAGAGTGCTC TACCAATATC TTGCTGCAAT GCAGAAAGAT GATATTCCTT GTGACAACTC ACTTCTGAGA CAAGTATCTA GCCTGCTAAG AAGATTGCCT GCCATGGAAT CAGAAAGATT TCAAGATAAT TTCTTGATGG AGTACAACGA CAAATTACTA ATAACTTACC TAGCGATGAT TACAAATTGT TCCAGCAACA TGAACGAGAT GGTCGACAAA TTCAACACCG CGTATGACAG AAACACTCGA AGAGGTGGTA GAACTGCATT CATGTAAAAG ATTCTCTCTA GCAATTTAAG TTCTAAAAGA TCTTCTCTTG GTTCCTGAAA CCATTTTTGT CTTTGTCTCT GTGAGAATCC GAAGACTTTA TCCTCTTCAT TGTTTCTATA TATATAAGAA ACATCTGCTT TCTATTGTTA GTAAAAAGAT TTAAA |
| Length | 1145 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_8: 16376038.. 16378242 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G56280.1 |
| Description | COP9 signalosome subunit 6A |
| TAIR curator summary | one of two genes encoding subunit 6 of COP9 signalosome complex. Protein contains a MPR1p and PAD1p N-terminal (MPN) domain at the N-terminal region and belongs to the Mov34 superfamily. Mutant and antisense expression result in a number of developmental defects and in ubiquitin/proteasome-mediated protein degradation. |
| Alias | [CSN6A][COP9 signalosome subunit 6A] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 25.4558 |
Ahg938862 | multiprotein bridging factor 1B |
| 30.5287 |
Ahg490336 | exocyst complex component sec15B |
| 35.3553 |
Ahg316139 | DNAse I-like superfamily protein |
| 36.5377 |
Ahg354576 | |
| 39.7618 |
Ahg935400 | Ras-related small GTP-binding family protein |
| 40.05 |
Ahg472070 | methylthioalkylmalate synthase-like 4 |
| 49.96 |
Ahg492791 | Cytidine/deoxycytidylate deaminase family protein |
| 50.2295 |
Ahg492821 | JUMONJI 14 |
| 52.915 |
Ahg351886 | Chaperone DnaJ-domain superfamily protein |
| 53.2729 |
Ahg912893 | nucleic acid binding;nucleic acid binding |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|