Detail



ID : Ahg495732

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|495732|fgenesh2_kg.8__1548__AT5G56400.1
Sequence
ATGAATCTCA TTCGATTTTT CCTTGTGTTT CAAGGTAAAA TTCAGGTGAA AGAATCAGCG AAAATCTTCA ATTGTCAGAG TGGTCAATTC AATGTGGACA AGATCAGTGA TCTTCCTGAA GATCTGCTTG TACACATATT GTCTTTACTT CCCACAACAA ACGATATTGT TGCCACAAGT GGTGTTTCGA AACGATGGAA ATCTCTGTGG AAGAAGGTAC ATAAACTCAG GTTCAACGAT CAAATCTATC ACGGTAAAAA GTATGAGAGT TTCCTTCACT TTGTTGAGAA AGCTTTGGTA TTACATAAGG CTCCTACTCT AGTAAGCCTC AGACTTAGTG TTGGTCCAAA ATGTACAGCT GATGATATCG GATTGTGGAT TAAACTCGCG CTGGATCGGA ATATCTGCGA GCTAATTATC AAACATTATG CCGATCACGG ACACATCAGG TTATCTAGGA GACTATGCGA TAGCAAAACC CTTGTTTCTT TAAAACTCAA GAACGCGATT CTTGGAGCTA TTTGTCTCCC AGCATGTTTC AGTTCACTCA AAACGCTTCA TCTTCGATAT GCGAAGTATT CCGGGGATGA ATTTGTTCGT AATCTCATAT CAAGCTGTCC TTCACTTCAA AATCTTGTCG TGAAACGACA CAATGAAGAC AACGTGAAGA GATTTGTTAT AATAGTGCGT TACTTAAAGA GTTTGACGGT TTATTTATCG CCGCTACATG ATGTAGCAGA TTCATATGCA TATGTGATAA ATACACCTAA TTTGAAGTAC TTAAACATTA AAGATCATTA CACTGCTCTA TGCTCTTTTG AAGATATGCC TTACCTAGAT GAGGCTAATC TCGACGTTGC CTTCACCCAT ACTGAGAAGT TTTTTGAATC TCTTACCTCT GTCAAGAAAC TTTCCTTATG CTTAAAGAAA TCAGAGGCTC AGTATCCTGA GGGTATTATC TTCTCTCAGC TTGTTCATTT GGAACTATGT ACATGTGATG ATTCAAAGTG GTTATATCTA CTCGCGAAAT TGCTTCGAGA TTCTCCAAAA CTTCGAGTGC TCAAGCTTAA TGATAAGAAC CATGATTTCG TTAGCAAGTA TTGCACTAGT TCTTGGAATC AGCAACCAAG TTATGTTCCA CAATGTTTGA CTGAAAATCT TGAAATTTTC GAGTGGCGAA ACTATAAAGC AACATTCAAA GAGAGAGATG TTGCGGTGTA TATCTTGAAG AATAGTACTT GTTTAAAGAA GTCGGTTATC TCCCCCAAAT TCAAGCTTTC AGGAGAGATT TGTGATCATC ATATCATCCG AGAAGACTTG GCATCTATGT TCATGGGCTC GAGTTCTTGT GAACTTAAAT TGGACTGA 
Length1368
Protein Sequence
Protein Residue
Map Locationscaffold_8: 16482260.. 16483812
Download Sequence
A.thaliana
AGI-codeAT5G56400.1
DescriptionFBD, F-box, Skp2-like and Leucine Rich Repeat domains containing protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
2.82843 Ahg312115
2.82843 Ahg893411 Paired amphipathic helix (PAH2) superfamily protein
12.6491 Ahg944497
13.5277 Ahg939548 TatD related DNase
16.7332 Ahg905981
17.8885 Ahg924030
19.0788 Ahg337048 ATP-dependent DNA ligase
22.5167 Ahg926428
26.533 Ahg897504
30.2985 Ahg891423
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression