| Annotation |
|---|
| Description | jgi|Araly1|337048|fgenesh1_pg.C_scaffold_1003613 |
| Sequence |
ATGTTTTCGT CTTCGTCCCA GCACCGGTCC GCATTTGACG TTCTTATGTC GAATTCTTCC GCCAAGAGGA AGAGGAAATT CGAGGAAACT GCAGATGCGC CGTCGTCTAG GGTTAACAAA ACCCTTGTTG GTATTTCTGA TTCCGCAAAA CCCAAATCAG ATAGGGTTAC CGAACTGAAG AGCAAAATTG GATTGCTGAA GAAGAAGCCA GCTGATTTCG ACCCGAGCAA AGTGTCTTGT TGGGACAAAG GGGAGAGAGT TCCGTTTATG TTTCTGTCCT TGGCTTTTGA TCTGATTGCA CTTGAAAGTG GCCGGATTGT CATCACTGAT ATTCTATGTA ACATGTTGAG AACCGCCATC GCCACTACTC AGGATGATTT GCTTTCTACG GTTTATCTTG CGGCCAATGA GATTGCACCT GCTCATGAAG GTGTCAAATT GGGAATTGGT AAGGGTTCCT CCATTATTAA GGCAATCTCA GAAGCTTTTG GGAGAACTAA GGCTCAGGTT AAGCAACAAT ATACACAATT GGGAGACTTA GGGCTTGTAG CAAAAGGAAG CCGTTCCTCT CAGACTGTGA TCTTCATGCA CAAACCATTA ACTGTATATA ACGAAGAGCA TTCAAAGCCA CCCCCAAATA TCAAGAATCC TTTAGATGAG GCTGCAACGA TTGTTAAAGA AGTATTCTCT GTGCTTCCTG TCTACGACCT TATTGTTGGT GCTCTTCTAA CTAGTGGTGT GTGGAATCTT CCTAAAACTT GTAAACTTAC ACCGGGTGTC CCAGTTAGAC CCAGGCTTGC AAAAGCAACT ACAAGTGTAG ATCTCATACT TGAGAAATTC GGGGACACCG TTTTCACAGC TGAATACAAA TATGATGGTG AACGTGCACA GATACATTAT ATGGAGGATG GTACAATCGA GATATTCAGT AGACATGCTG AAAGAAACAC TGGCAAGTAC CCTGATGTTG CTCTTGCGTT ATCAAGGTTT AAGAAGCCCG CTGTAAAATC TTTTATTCTG GATTGCGAGG TTGTTGCCTT CAACAGGGAG GAAAAGAAAA TTCTTCCGCT CCAGACTTTG AGCACTCGAG CCCATAAAAA TGTGAATGTC AGTGATATCA AGGTTGGCGT ATATGTCTTT GCTTTTGATA TATTATATCT AAATGGCCAA CTACTTATCC AGGAGAATCT GAATATTCGC CGAGAGAAGC TATACGATTC ATTTGAGGAA GATCCTGGGT ATTTCCAATT TGCAACTGCT CTAACATCCA ACGATATTGG TGAATTACAA GAGTTTCTTA AAGCTTCTAT TGACATTGGA TGTGAAGGTT TAATGATAAA GTCATTGTAC TCGAATGCAA CCTATGAGCC TGCAAAGAGC ATTGGAGATT CTGTGGATCT AGTACCAATT GCGGCTTTCC ATGGACGTGG GAAACGCACA GGTTTCTTTG GTGCATTTTT ACTAGCGTGC TACGATGTCG ACAAGGAAGA ATTCCAGAGC ATTTGTAAAA TTGGTACTGG ATTTTCTGAC GCGGAGCTTC AAGAGCTGTC TTCCAGTCTT TTCTCTAAAG TGATTGCTAT ACCAAAACAA TACTACCAAG TCGATGACGG TCTCAATCCA GATGTCTGGT TGGAGCCCAC CGAGGTGTGG GAAGTGAAAG CAGCTGACTT GACAATTAGC CCTGTACATC GTGCAGCTAT CGGAATTGTG GACCCTGATA AGGGAATTTC TCTACGTTTT CCTCGTTTAG TCCGTGTGCG GAAAGACAAG AATCCAGAGG AAGCAACATC ATCTGACCAG ATTGCTGAAA TGTATCAAGC TCAGAAAAAC ACAATCAACC AAGCAATCAA GGCAAAGGTG ACGACGGTTG AACAATAA |
| Length | 1878 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 24096566.. 24099667 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G49250.1 |
| Description | ATP-dependent DNA ligase |
| TAIR curator summary | |
| Alias | |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1.73205 |
Ahg312115 | |
| 2.82843 |
Ahg914056 | F-box family protein |
| 19.0788 |
Ahg495732 | FBD, F-box, Skp2-like and Leucine Rich Repeat domains containing protein |
| 20.4939 |
Ahg944025 | Pentatricopeptide repeat (PPR) superfamily protein |
| 22.9783 |
Ahg897017 | |
| 24.4949 |
Ahg944993 | |
| 24.98 |
Ahg342623 | F-box and associated interaction domains-containing protein |
| 26.8328 |
Ahg936491 | |
| 33.8821 |
Ahg946833 | Protein of Unknown Function (DUF239) |
| 35.1426 |
Ahg904089 | S-locus related protein SLR1, putative (S1) |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|