Detail



ID : Ahg495741

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|495741|fgenesh2_kg.8__1557__AT5G56510.1
Sequence
ATGGATCAGA GAAGAGGAAA TGAGCTTGAT GAATTTGAGA AGCTTCTTGG AGAGATTCCA AAAGTTACTT CAGGAAACGA CTATAACCAT TTCCCTATAT GTATGAGCTC AAGCAGATCA TCACAATCCA TCAAGAAGAT GGATCAATAT CTTCCTGATG ACCGCGCTTT TACCACTTCA TTTGCTGAGG CTAACTTACA CTTTGGAATC CCAAACCAAG CTCCTGAATC TCCCCATCCT TTGTTCATTA ATCCTACTTA CCACTCACCA AGTAGCTCAC CATGTGTATA TGACAAGTTT GATTCAAGAA AACTTGATCC GGTAATGTTC AGGAAGCTGC AACAAGTTGG ATGCTTTCCA AACTTCTCTT CCGGGATCTC ACCTGCTCAG CCGCAGCATT ACCTGCCACA TTCGCAGTCT CTGTCTCACT ATCAATCTCC TATGAATTGG AGGAATATGG AAGAGGAAAA TTTTCAGAGG CTTAAACTGC AAGAAGAACA GTATTTGTCT ATGAACCCTC ATTTCCTTCA TCTTCAGGGC ATGGATACTG TTCCAAGACA GGAGCATTTC GATTATCGCC GAGCTGAACA GTCTAACAGA AACCTGTTTT GGAATGGGGA AGATGGTAAT GAAAGTGTGA GGAAAATGTG TTATCCGGAG AAGATTTTGA TGAGATCACA GCTCGATTTG AACACTGCTA AAGTCATAAA GTATGGTGCT GGAGATGATT CACAAAATGG AAGACTTTGG TTGCAGAATC AACTCAATGA AGATCATCTC ACAATGAGCC TCAACAATCT GTCATTGCAG CCTCAAAAGT ATAACTCTCT TGCAGAGGCA AGAGGGAAGA TATACTACTT GGCAAAGGAT CAGCACGGTT GTCGCTTCTT GCAGAGGATA TTTGCTGAGA AAGATGGGAA TGATATAGAG ATGATCTTTG ATGAGATCAT TGACTATATC AGTGAGCTTA TGATAGATCC TTTTGGGAAT TATTTGGTTC AAAAGCTGCT CGAAGTATGC AACGAGGATC AGAGAATGCA GATTGTTCAT TCCATAACTA GAAAACCAGG ACTGCTAATC AAAATCTCTT GTGATATGCA CGGGACTAGA GCTGTTCAAA AGATCGTTGA AACGGCTAAG AGGGAAGAGG AGATTTCAAT CATCATTTCT GCTTTGAAGC ATGGCATTGT GAATTTGATA AAGAATGTAA ACGGTAATCA CGTTGTTCAA CGATGCTTGC AGTATCTATT ACCTCACTGC GGCAAGTTCC TTTTCGAAGC TGCCATTACT CATTGTGTTG ACCTTGCAAC TGATCGACAT GGATGTTGTG TACTTCAAAA ATGTCTTGGC TATTCCGAAG GCGAACAAAA GCAACACTTA GTCTCTGAAA TTGCGTCAAA TGCTCTACTC CTCTCTCAAG ACCCTTTTGG GAACTATGTT CTTCAATATG TCTTTGAGCT TCAACTTCAA TGGGCAACCT TTGAAATCCT CGAGCAATTA GAAGGAAACT ACACCGAGTT ATCGATGCAG AAATGTAGCA GCAATGTAGT TGAAAAGTGT CTGAAACTAG CTGATGACAA ACACCGAGCT CGCATCATCC GAGAATTGAT TAACTATGGT CGTCTTGATC AAGTTATGTT GGATCCTTAT GGAAATTATG TCATTCAAGC AGCTCTTAGA CAATCTAAGG GGAATGTTCA TGCTCTTTTG GTTGATGCCA TTAAACTTCA TATCTCATCT CTTCGTACCA ATCCTTACGG TAAAAAAGTC CTCTCCGCAC TTAGCTCGAA GAAGT 
Length1795
Protein Sequence
Protein Residue
Map Locationscaffold_8: 16539897.. 16542074
Download Sequence
A.thaliana
AGI-codeAT5G56510.1
Descriptionpumilio 12
TAIR curator summaryEncodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3' UTR of target mRNA transcripts.
Alias[APUM12][PUM12][pumilio 12]
Gene coexpression
MR
MR Locus Description
22.8035 Ahg932562 Protein of unknown function (DUF295)
34.4529 Ahg486927 cation exchanger 4
37.6563 Ahg897485
64.8999 Ahg897091
67.8233 Ahg931789
69.2459 Ahg931891
73.4234 Ahg351609 Protein of Unknown Function (DUF239)
92.4121 Ahg890845
96.0417 Ahg914277 sucrose-phosphatase 1
96.8504 Ahg487498 bZIP transcription factor family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression