Detail



ID : Ahg495816

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|495816|fgenesh2_kg.8__1632__AT5G57190.1
Sequence
ATGGGAAACG GAAACTCAAG GGAGGCTAAA GAATCGAGAC GGTCAAAGCT ACGACAGAAG CTACAAAAGT TTCGCATTCA CCGTCGTCAT CTTCGTTGTT CTCGAAACTC AGCAGGAATG GTGATACAAC GAGCTGTGTC CGCCGAGGAT TTCTCCGGCA TTGCGCTTCT CACTTTAAGG ACAAGTGGCT CGCTTGTGTT TCTTTCGGTG AACAGACTTT TAGAACTAAA ATCTCAGATA CTACAGAGAA GCCAATTTGG AACTCAGAGA AGAAGCTTTT GTTGGAGAAA AATGGACCAA GTCTTGCTAG GGTCTCTGTA TTTGAGGTTT CTATTATCCA TATTTTTGAG TTTAGTCCTG AATCATGACA TTACCAGTAG GCTCTCAAGG AACAAAATCA TCGGTTATTG TGAGCTTGAT ATATTCGATT TTGTAGTGCA GGAACCTGAG TCGGCGTGTA AGTCATTTGA CTTGTTAGAT CCCACATCAT CCAATGTTGT TGGCACCATT TTCCTTTCTT GCTCTATTGA GGATCCTGTT GAAACCGAGA GGCGGTTTGC AAAGCGTATC TTGTCCATTG TGGACTACAA TCAAGATGGA CAACTGTCGT TTTCGGAGTT CTCTGATCTA ATAAAGGCTT TTGGAAACTT AGTGGCTGCT AACAAGAAGG AGGAGTTGTT CAAAGCCGCT GATCTGAATG GGGACGGTGT TGTGACAATT GACGAGTTGG CTGCGCTTCT TGCTCTTCAA CAAGAACAGG AGCCAATTAT AAATAATTGT CCGGTGTGTG GTGAGGCTCT TCAGCTCTCT GACAAGCTCA ACGCGATGAT CCATATGACT CTTTGTTTTG ACGAAGGAAC GGGTAATCAA GTGATGACCG GAGGGTTTTT GACTGATAGA CAAGCTTCTT ATGGTTGGAT GTTCAAACTA AGTGAATGGA CACACTTATC AACTTATGAC GTGGGTTTGA ATACTGGTTC AAGTGCTTCA TATATTGTGG TGATTGACCG GAAGAGTAAG AGACTTGTGG AAGAGTTGAT TGACTCAAAG ATTGTTCTGT CCATGAGAGC TATTTATCAG TCCAAAATTG GATTCCGACT TATGGATCAA GGGGCAAAGG AGATTCTACA GAGACTTTCT GAGAAGCAGG GGAAGAAAAT GAGCTCAGTT GAATCCGCAC AAAAAATACC ATGCTTTCTC GAGTTCTTTA AGGCATTTGA GATTTTTTGT CTGTTGCTGG ATCAAATAAA CATGGCTGAA GTCAAGTATT CTCTGCAGCA TTTTAAGACG TTCAATGAGT TCTTCATCCG GGAGTTGAAA CCTGGTGCAA GACCAATTGC TTGCATGAAA CGTGATGATG TTGCCGTATG TGCTGCTGAT TGTCGTGTAA TGGCATTTCA GTCGGTGGAG GATAGTACAC GTTTCTGGAT CAAGAGAACT CTCAAAGCTG ATAAGTTGCA ACACATCTTA AAGTTTTTGC CTCCTTGGGA AGAATGTGAA TCCAAAATGC CTTCCTTGAT GGATCTTTGG CTAGAACACT ACATAGTTCT TGATTATCAT CGCTTTCATG TCCCTGTCTC TGGAGTCATT GAAAAGTTTG CTTTTATTGC AATCGGTGCG ACAATGGTTG GTAGCATAAA TTTTGTCAGA AAGGAAGGAG AGCATGTGAA GAAAGGAGAT GAAGTAAGCA GTTTCGACTT TTCGCAAGAA ACAGTGGAAG CTTGGTTATT TTTCGTTTGG TGGAAGCACG ATATGATATA TTCACTGTTT TTTAAAAATC AATCTGAATT GACTACTCTT TTTTCACTTA ACACATTTTT GCAGGACTCG ATCCAGATCG ATGAGGATCT CTTGGTAAAC AGTGGTAGGT CCTTAGAGAC GTTAGTGAGA GTTGGAATGC AATTAGGTGT CTCCACAAGG ACATTTGCTA GGTCTACATG A 
Length1941
Protein Sequence
Protein Residue
Map Locationscaffold_8: 16905947.. 16909311
Download Sequence
A.thaliana
AGI-codeAT5G57190.1
Descriptionphosphatidylserine decarboxylase 2
TAIR curator summaryEncodes the minor form of the two non-mitochondrail phosphatidylserine decarboxylase. The gene expression level is very low. Located at the tonoplast.
Alias[PSD2][phosphatidylserine decarboxylase 2]
Gene coexpression
MR
MR Locus Description
14.7648 Ahg492103 Protein of unknown function, DUF584
17.3205 Ahg478787
22.6053 Ahg932721
25.865 Ahg908002 embryo defective 1745
32.8634 Ahg484673 NAC domain containing protein 3
38.833 Ahg321431 Thioredoxin superfamily protein
42.2493 Ahg472556
48.8672 Ahg917419 Tautomerase/MIF superfamily protein
53.1413 Ahg937842 CYCLIN D3;3
57.4456 Ahg344726
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression