Detail



ID : Ahg495923

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|495923|fgenesh2_kg.8__1739__AT5G58160.1
Sequence
ATGAAATATC ATTTCATCAT GATTGGCAAT AACCACATTG AACTGAATTG TAGTGTTCGA TTGCTGCTTC TCTACCGATT CATGGGAAGA AGAAAACTAC AAAGTTTATA TGGCGGGAGT AGTCAATCAA CTACAGGAGC ACTTCCCTGA AGCATCTTCT CTTGTGTTTA ATTTCCGTGA AGTGGGTACT CGGAGTGTGA TGGCTGATGT CTTGTCAGAA CATGGTTTGA CCATAATGGA TTATCCTCGG CACTACGAAG GCTGCTCATT GTTACCTGTG GAAGTTATGC ACCATTTTCT CCGGTCAAGT GAAAGCTGGC TCTCACTCGG CCCAAATAAC TTGTTACTAA TGCATTGTGA AAGCGGGGCT TGGCCAGTTT TAGCTTTTAT GCTAGCTGCC CTCCTTATAT ACCGGAAGCA GTATAGTGGT GAGTACAAGA CTTTGGACAT GATCTACAAG CAGGCTCCGC GTGAGCTTCT GCGTTTGTTC TCACCGTTGA ACCCAATTCC CTCTCAGCTT CGCTATCTAC AGTACGTTTC GAGAAGGAAT TTGGTCTCTG AATGGCCTCC ACTGGATAGG GCTCTCACCA TGGATTGTGT TATTTTGAGA TTTATTCCTG ATGTTAGTGG ACAAGGAGGC TTTCGCCCAA TGTTCCGAAT ATATGGTCAG GATCCCTTTT TTGTAGATGA TAAAAAGCCC AAGCTTTTGT ACTCTACTCC CAAGAAAGGG AAACACCTGA GGCTCTACAA GCAGGCAGAA TGTGAACTAG TCAAGATTGA CATTAATTGT CATGTGCAAG GTGATATCGT GATCGAGTGC CTCAGTTTGA ACGATGACAT GGAAAGAGAG GTCATGATGT TTCGAGTGGT TTTCAATACT GCTTTTATTA GATCAAACAT TTTGATGCTT AACCGTGATG AAGTCGACAC ATTATGGCAT ATAAAAGAAT TCCCAAAGGG ATTCAGAGTT GAGCTTCTCT TCTCAGATAT GGATGCTGCA TCTTCTGTTG ACTTGATGAA TTTTTCGTTC TTGGAAGAGA AAGATGGTCT TCCCATAGAA GTTTTTTCCA AAGTTCATGA GTTCTTCAAT CAAGTTGACT GGGTTGATCA GACGGATGCC ACACGCAATA TGCTTCAGCA GTTAGCCATT GCAAATGCTG TTCAGGAAGG ACCAGATGGG AATTCAAGCC CAAGACTACA AGGGTTAAGC CCTAGAAGTA TCCATGATAT TATGAAACAT GCAGCAATTG AAAATAGTGC AAAGTTCAAA TTGTCTTCAA TGTCCGAGGT TGAAACAATC AACACACCAG AAAAGCCTCC TACTGATTCA GTCAAGACGT TTATAGCAGA AGATTTACAT TCTGTCCTTC AGATAAGTAA TCAGGAAAAA ACCGCCAGCC AGGAGGCAAC CAAGTTGTTA CATGAAGAGT CCCCTTCTCT CAAGCTTGTG CATCATTCTG CTACAGTTAA ACCTCTTGTG GACGGTTCTA AATCTTCAGA ATATGTTGAG GAGAATTTTC TGAAAAGTCC TTCAGCAAAC AGTGGGAAAG CAATTTCGTT TTCGCCACCC ACACCGTCAC CACCTCATCC TGCAAGACCG CAGTTGGCTC TAGCGGGAGC ACCTCCCCCA CCTCCTCCAC TTCCAGCTGC TGCTTCTAAG CCTTCAGAGC AATTGCAGCA TTCTGTTGTT CAACCAACAG AGCCTCTGTC ACAAGGAAAT TCCTGGATGT CATTAGCAGG CTCTACGTTT TATCAAACAG TTCCAAACGA AAAAAATCCC ATTACACTGC CTCCAACACC TCCCCTTACT TCTACATCAC ATTCCTGTCC TGAGCCATCA TCTAAAACAA CAACTTCATT GTTACAGTCA CCTCAAGCAT CATCAGCTAC TCCCGCCAAC CCATTAAAAA CTGTTTCAGT AGATTCTTTT GGTCCTGCTA CTTCACCTCA TTTAGGAGCG TCCGATAATG TGGCTTCAAA TCTTGGACAA CCGGCGAGGT CACCTCCTCC AGTATCTAAT TCAGACAAAA AGCCTGCTTT GCCTCGACCG CCTCCTCCTC CTCCTCCCCC TCCAATGCAG CATTCCACAG TCACTAAAGT CCCCCCTCCA CCACCACCAC CACCACCAGC ACCCCCAGCA CCATTTGTTC ATGCCTCTTC TCCCCCTCCC CCTCCTCCGC CCGCTCCTCC TACACCACAT TCTAATGGAA TCTCTGCTAT GAAAAGTTCA CCTCCTGCAC CCCCTGCACC TCCCCGGCTT CCCACCCATT CTGCCTCTCC TCCCCCTCCA ACCTTGAAGC CATACCACTG GTTGAAACTG ACAAGAGCTG TCAATGGGAG CTTATGGGCT GAAACACAAA TGTCTAGGGA AGCTTCTAAG TATGCATTAT TCTTGCATGA TTTCCAATTC ATTGATACTT TACCTCTTTG TCTTGAAAGT CTGTTCTCCG CATCTGCTCC AGAGCAGGCA GGAAAATCGA GACTAGATAG CTCTCGTGGA CCTAAACCCG AGAAAGTCCA ACTGATTGAA CACCGGCGAG CGTACAATTG TGAAATTATG CTTTCAAAAG TGAAAGTACC TTTGCAGGAT TTGACGAACT CAGTGCTTAA CCTGGAGGAG TCGGCTCTTG ATGCTGATCA GGTTGAGAAC CTAATTAAAT TTTGCCCAAC AAGAGAAGAA ATGGAATTAC TAAAGGGTTA CACTGGTGAC AAGGACAAGC TTGGAAAATG CGAACTGTTC TTCTTAGAGA TGATGAAAGT CCCACGAGTA GAAACAAAGC TCAGGGTATT CTCATTCAAA ATGCAGTTTA CCTCTCAGAT TTCTGAACTA AGGAATAGTC TAGGTGTTGT GAACTCCGCA TCAGAACAGG CAAATCAGAC TCACTGGACA ATTTTATCCC TTGGGAACGC CCTAAACCAA GGGACGGCTA GGGGTGCTGC GGTTGGGTTT AAATTGGACA GTTTGCCGAA ACTCAGTGAA ACACGGGCGC GTAATAACCG AATGACTCTG ATGCATTATC TATGCAAGGT AAGCTATTAT AGTCTGCTCT TCTGTAGCTT TATGGATGTA CTAGAGGAAG AAAGATATAG TCTGATGGAT TCTTTACAGA TTCTTGCTGA AAAAATCCCA GAAGTTTTAG ATTTTACAAA AGAATTATCC TCGTTGGAGC CGGCAACAAA GATTCAACTG AAGTTTCTGG CCGAGGAGAT GCAAGCTATA AACAAGGGAC TGGAGAAAGT CGTACAGGAA CTTTCCTTGT CCGAAAATGA TGGCCCGATT TCACATAACT TTAACAAGAT ATTGAAGGAG TTCCTTCATT ATGCGGAAGC AGAAGTAAGG TCGTTGGCTT CACTCTATTC AGGAGTGGGA AGAAACGTGG ATGGCTTAAT TCTCTACTTT GGTGAAGACC CTGCCAAGTG CCCTTTTGAA CAAGTGGTGT CGACTCTTCT AAACTTTGTA AGACTGTTCA ATCGTGCGCT TGAAGAAAAC GGAAAACAAC TCGAGGCAGA AGCTAAGAAG AATGCTGCTG AAAAGGAGAA ACCAAAAACA GGTGGATTAG ATAAAGAAAT CAAGAAGCCC TTGGATGAAG AAGTTAAGGA GAAAACAAAA ACAAGTGGAT TAGGTAAAGA AATGAGTGAG CGAATAAAGG AAAGAACCGC TCCTTGA 
Length3667
Protein Sequence
Protein Residue
Map Locationscaffold_8: 17332521.. 17338027
Download Sequence
A.thaliana
AGI-codeAT5G58160.1
Descriptionactin binding
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
23.4947 Ahg480436 Phox-associated domain;Phox-like;Sorting nexin, C-terminal
24.1247 Ahg495173 Clp ATPase
27.8209 Ahg928001 threonine aldolase 2
31.305 Ahg353623 Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein
37.8946 Ahg482040 Plant protein of unknown function (DUF828)
41.2432 Ahg472286 acyl activating enzyme 1
42.8135 Ahg921070 PLATZ transcription factor family protein
48.1352 Ahg471173 Cysteine proteinases superfamily protein
48.7442 Ahg327414 methionine sulfoxide reductase B3
51.672 Ahg479152 response regulator 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression