| Annotation |
|---|
| Description | jgi|Araly1|495984|fgenesh2_kg.8__1800__AT5G58600.1 |
| Sequence |
ATTATTTTAC AGCTTCCTTT TTTTGTTTTC CGCGAGAAAG CAAAAAAGAT GGGTTCTCTT CTTCTTCTTG GCATCTCAGT CTCCGCCATT TTCTTTCTGT TGCTTCAACA ACCAGAACAA TCTTCTTCAG CCATTATACT GAGCTTGAAG AAACGCCATG GAAGCTCTGG TAGTAGTGGT AACCAGTACA GCTCGAGCAG ACCATCAGCT GGTTTCCAAG GGAACAGGAG CACGTGCTCT CTCTTCCTCG GCACGTGGGT TCGTGATAAC TCTTACCCTC TCTATAAACC GGCGGATTGT CCCGGCGTCG TTGAGCCTGA GTTCGATTGC CAGATGTACG GACGTCCTGA CTCTGACTAC CTCAAGTATC GATGGCAACC TCAGAATTGC AATTTACCCA CGTTCAATGG TGCCCAGTTT CTGTTGAAAA TGAAGGGCAA AACCATAATG TTTGCGGGTG ATTCATTGGG TAAGAATCAA TGGGAGTCTT TGATCTGTCT CATTGTTTCA TCTGCACCGT CCACTCGGAC CGAAATGAGG AGAGGCCTCC CTCTTTCCAC CTTCAGATTC TTGGATTATG GGATAACCAT GTCGTTTTAC AAAGCTCCGT TCTTGGTGGA CATAGATGCT GTTCAAGGCA AGCGAGTGTT GAAACTAGAT GAGATCTCTG GCAATGCCAA CGCTTGGCAT GACGCTGATC TCCTCATCTT CAACACCGGT CACTGGTGGA GCCACACCGG ATCTACGCAA GGATGGGACT TGATTCAATC AGGCAATTCT TATTACCAAG ACATGGACCG TTTCGTCGCA ATGGAGAAAG CACTTCGTAC TTGGGCTTAT TGGGTCGAAA CTCACGTTGA TAGATCCCGA ACACAAGTCT TGTTCCTCTC CATTTCTCCA ACACACGACA ACCCGAGTGA CTGGGCGGCA TCATCGTCTT CAGGATCCAA GAACTGCTAC GGAGAAACAG AACCAATCAC AGGAACAGCT TATCCAGTTA GCTCATACAC AGATCAGCTA AGATCAGTGA TTGTTGAAGT CCTTCACGGT ATGCATAATC CTGCTTATCT TCTCGACATA ACGCTCCTGT CTTCATTCAG AAAAGACGGT CACCCGTCAG TCTACAGCGG TCTCATTAGC GGTTCACAAA GGTCTAGACC AGACCAGTCT GCAGATTGTA GCCATTGGTG TTTGCCGGGT CTACCGGATA CATGGAACCA GTTGTTGTAT ACGCTTCTCA TCTATTAGCT TCTTTTTAAT TCTCCTTCAA TCAAATTATC CGGTTAGAAA TATTTTAACA CATTTGAAGA GAGAATCTTA AAGATTAATC ACGGAATCAG TCAATTGTAT AAACTTTTTG AGGAAATTTT CTTTCTAATG A |
| Length | 1381 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_8: 17539104.. 17541009 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G58600.1 |
| Description | Plant protein of unknown function (DUF828) |
| TAIR curator summary | Belongs to a large family of plant-specific genes of unknown function. Involved in resistance to the powdery mildew species Erysiphe cichoracearum and Erysiphe orontii, but not to the unrelated pathogens Pseudomonas syringae or Peronospora parasitica. A member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). |
| Alias | [PMR5][TBL44][POWDERY MILDEW RESISTANT 5][TRICHOME BIREFRINGENCE-LIKE 44] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 16.3095 |
Ahg923403 | poly(A) binding protein 8 |
| 23.3666 |
Ahg494014 | homeobox protein 23 |
| 31.1769 |
Ahg488871 | tubulin alpha-5 |
| 32.3728 |
Ahg485617 | Eukaryotic aspartyl protease family protein |
| 33.7639 |
Ahg472226 | tubulin beta-5 chain |
| 33.8821 |
Ahg938360 | Eukaryotic aspartyl protease family protein |
| 51.2348 |
Ahg491940 | Glycosyl hydrolase superfamily protein |
| 51.7687 |
Ahg494345 | Minichromosome maintenance (MCM2/3/5) family protein |
| 53.5724 |
Ahg473757 | ribosomal protein 1 |
| 55 |
Ahg945268 | Major facilitator superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
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| The four seasons |
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| Growth Chamber expression |
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