Detail



ID : Ahg496019

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|496019|fgenesh2_kg.8__1835__AT5G58960.1
Sequence
TATATTAGAG TTCATCTCTT TGGTTCTAAA GAAAGAGAAA GAGAGAGGAA GAGAAAATGT TGCCAGGCAT TCTTTTATGC TCAGTTAATC CTAGGAATCA CAGCAAAAAG AAGAAGATTG ATCGAGAGAG CTTAGAAACT GAGCCCAAAG ACATTGACTA CTGGCGCTCT GTTCAATTCA ATCGAGATCC TCCGAGATTT GCTCTCAAAT CAGAGAACAC CAATCACCAT TCCCGCAGGA GCGGCGGCGA ATTTGGGAAG ACGAAGAAGC GAGGAGAAAT GGCGAACAAG GTTTCTAACT TCTCGGATCT GATTCAACGA GTTACTGCGT CTTGTTTGTT GCATCCGCTC GCCGCCGGCC GGCAAGATCT CGCTGGAAAC CGCCGGGAAG AGTACGATAC TGAAGAAGAG GAGAATGAGG GGGAGGGAGA GATTCAGTAC GAAGACGCAT TGGAGAAGGA GAATGGTAAA GATGAGACTA TTAGGGCTAA GACCGGAAGG AGCGGCGTGA GTGTTGAGGC GTTGCAGGAG ATGGAGATGG TGATGGAGCA AGTTTTCACA GCGGCGGCTG CTATGAAGAG AGCTTACGTG GCGCTTCAGG AAGCGCATTC GCCGTGGGAT CCGGAGAAGA TGCACGATGC TGATATGGCC ATGGTGGCTG AGCTGAGAAG GATTGGCTCG TTGAGGGAAA GATTCAGGAG GATGAGAGGT ACCGGAAGTG GTGGTCGGCG GAAAAACGAC GCCGGAAGAG GGATGCTGAG AGAGGCGGTG GCGCCGTACG AGGCCGTTGT GAAGGAGCTG AAGAAAGAAG TGAAGGTGAA AGATACTGAG ATTGAGAATC TGAAGGAGAA ACTCAAAGTG GCTAGTTCTA TGGCCAACGG TAACGGAGGC AAGAAACACC GATTGCTTTC AAGCCGGAAA GTTAACTGCA CCACACAGAT CGCTGTATCT CCTGTGCCGG AGTTATTCGA GATGACTATG ATTCAGGTGA AAGAAGCATC AAAGTCTTTC ACAGGGATTC TATTGTCACT GATGCGAGCT GCGCATTGGG ACATTGCAGC GGCTGTTCGA TCCATTGAAG CCGCTTCAGC TTCATCAGAC GGAATGTCGG CTTCTTTGTT TGCATCCTCG GTGCAGTCCT CTGTCCCGAA CCAGCACGCC AAATTTGCTC TTGAGTCTTA CATCTGTCGG AAAATCTTCC AAGGATTCGA TCACGAAACG TTTTACATGG ATGGAAGCTT ATCTTCTCTT ATCAACCCGG ATCAATACCG CCGTGACTGC TTCGCGCAGT TCAAAGATAT GAAAGCAATG GATCCTATGG AGTTGCTAGG GATCTTACCG ACTTGCCATT TTGGTAAGTT CTGCTCAAAG AAGTATCTTT CGATCATTCA CCACAAAATG GAAGAGTCGT TGTTCGGCGA CTCGGAACAG CGGGAGCTGG TTCTAGCCGG TAACCACCCA AGAAGTCAGT TCTATGGAGA GTTCTTGGGA TTAGCTAAAG CGGTCTGGCT GCTTCATCTT TTGGCGTTCT CGCTCGATCC ATCCCCAAGT CACTTTGAAG CAAACCGAGG AGCTGAGTTT CACTCTCAGT ACATGGAGAG CGTCGTGAAG TTCTCGGATG GCCGTGTTCC TGTGGGTCAA GTTGTTGGGT TTCCTGTTTG TCCAGGATTC AAGCTTAGCC ATCAAGGGAA AGGATCAATC ATCAAATCCA GAGTTTACTT GGTTCCAAGG GCTTAAAACG GTTTTCATTG AGTTCACTGT TTCTTAGGAA TATATTATGG CGTTGTGTTG TTTAAGACAA TCTAGCTTTG GAAAAATCTT GAAATAAAGA GATCGTTCAT AT 
Length1842
Protein Sequence
Protein Residue
Map Locationscaffold_8: 17723260.. 17725973
Download Sequence
A.thaliana
AGI-codeAT5G58960.1
DescriptionPlant protein of unknown function (DUF641)
TAIR curator summaryMutant plants display impaired light-regulation of the hypocotyl randomization response.
Alias[GIL1][GRAVITROPIC IN THE LIGHT]
Gene coexpression
MR
MR Locus Description
16.2481 Ahg321185 Outer arm dynein light chain 1 protein
19.4422 Ahg491251 Domain of unknown function (DUF303)
20.6155 Ahg475021
24.7386 Ahg495241 subtilase 1.3
27.8209 Ahg497111 Gamma interferon responsive lysosomal thiol (GILT) reductase family protein
28.1603 Ahg491495 TPX2 (targeting protein for Xklp2) protein family
29.6648 Ahg897712 non-specific phospholipase C6
29.6985 Ahg480231 cycloartenol synthase 1
30.1993 Ahg491790 polyamine oxidase 5
36.5787 Ahg481491 Leucine-rich receptor-like protein kinase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression