Detail



ID : Ahg496254

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|496254|fgenesh2_kg.8__2070__AT5G61000.1
Sequence
ATCGAGAGAG AAAGATGCAG ACTTCGGTGA CCCCAGATGC TATCTCCACC GTATTGTCAA ACCCATCCTT TGATTCCTCC TCCGAACGAC CTCAAATCGT TGTTCAAGTT GTGGATCTTA AACCTATCGG CAATCGATAT ACATTTAGTG CTAATGACGG AAAGACGAAA GTCAAAGCAA TGTTTACACC TACACTCACA CCTGAAATTA TTTCTGGAAA GATCCAGAAT CTGGGCCTAG TTCGTCTCAT TGATTTCACA GTTAACGACA TATCAAGCAA ATCAACAAAA TATTTCCTTG TGAATAAGTG TGAGGCTGTT GGTTCTGTGC TTGATTCTGA GATCAACTTG GAGAGTAAGA GCCATGAGGA GGCTAGTGAT CCCAAGAAAC AGAAGCTAGA GCATTCTCCT CTCAGTCCTG TGAATGATGT TAAAACGGAT GTTTCTACTG GTATCACATT GAAACCCAAG CAGGAATTTG TAGCCAAATC AGCCTCTCAG ATAATGAGTG AACAGAGGGG AAATGCTGCA CCAGCTGCAA GAATGGCCAT GACTAGAAGG GTTCATCCAC TTGTGTCATT AAACCCCTAT CAAGGAAATT GGACCATCAA AGTCCGAGTT ACAAACAAGG GAGTCATGAG AAATTACAAA AACGCTAGAG GGGAAGGATG TGTCTTCAAT GTGGAACTTA CTGACGAAGA AGGAACACAA ATTCAAGCAA CAATGTTTAA TGATGCTGCA AGGAAGTTTT ACGAGAGATT CCAATTGGGA AAGGTCTATT ATATATCAAG GGGGTCACTT AAACTTGCTA ACAAGCAGTT CAAGACAGTT CAGAATGATT ATGAGATGAC ACTGAATGAA AATTCAGAGG TTGAGGAAGC TAGTAGCGAA GAAATGTTCA TCCCTGAGAC AAAATTCAAC TTTGTACCCA TTGAAGAGTT GGGTTTGTAT GTAAATCAGA AGGAGCTTAT TGATCTTATC GGAGTTGTTC AAAGTGTATC TCCTACCATG AGTATTAGAA GGAGAACTGA CAATGAGATG ATTCCTAAGA GGGATATAAC TTTGGCTGAT GAGTCGAAGA AAACTGTCGT GGTGTCCCTG TGGAACGACC TTGCAACTGG CATAGGTCAA GAACTGCTAG ACATGGCTGA TAAGTCACCT GTGGTCGCAA TCAAGTCTCT CAAAGTTGGA GATTTTCAAG GTGTTTCATT GTCCACTATC AGCAGAAGCA ATGTGGTTAT AAACCCGGAA TCACCAGAAG CTAAAAAGTT GAAATCTTGG TTTGATTCTG AAGGCAAGGA AATATCCATG TCTTCCATTG GCTCAGGGAT GAGCCCATCT TCCAAGAATG GATCTCGGTC TATGTATACT GACCGAGTCC TTCTCTCACA CATCACAAGC AACCCATCTT TAGGCGAAGA GAAGCCTGTA TTTTTCAGCA CCAGGGCTTA CATAAGCTTC ATCAAACCAG ATCAGACAAT GTGGTACCAA GCTTGTAAGA CTTGTAACAA GAAAGTGACT GAAGCCCTTG ACTCTGGTTA CTGGTGTGAA GGATGCCAGA AAAAATATGA AGAATGCAGC CTAAGGTACA TAATGGCGGT GAAAGTCACT GATTCATCTG GAGAAACATG GATTTCCTCA TTCAATGATG AAGCAGAGAA GATTCTTGGA TGTTCAGCTG ATGATCTCAA CAAACTAAGA TCAGAGGAAG GTGAAGTAAA TGAATATCAG ACAAAACTGA AAGAAGCAAC GTGGTCATCT CATGTCTTCC GGGTTAGTGT CACTCAGAAT GAGTATAACG GTGAGAAGAG GCAAAGGGTA ACTGTGAAAG GAGTAGCTCC TCTTGATTTT GCTGCTGAAA CAAGATTGTT GCTCCAAGAC ATCTCCAACA AGAACAAAGC ATCTCAGTAG TTAGTTTTTT GTTTTTCCAT TCCTCTACTG GCCTAAAAAA GTCTAAAACT TTGCTTGTAA TATAAGCCTT TCTGCAATAT ATATTATTAG GGTTTT 
Length2006
Protein Sequence
Protein Residue
Map Locationscaffold_8: 18624680.. 18627735
Download Sequence
A.thaliana
AGI-codeAT5G61000.1
DescriptionReplication factor-A protein 1-related
TAIR curator summary
Alias[ATRPA70D][RPA70D]
Gene coexpression
MR
MR Locus Description
2.44949 Ahg358205 histone H2A 6
4 Ahg331330 methyltransferase 1
6.32456 Ahg489144 histone B2
8.06226 Ahg494345 Minichromosome maintenance (MCM2/3/5) family protein
8.12404 Ahg940507 Histone superfamily protein
10.4403 Ahg472662 MLP-like protein 423
12 Ahg471009 Histone superfamily protein
12.8062 Ahg937435 DUTP-PYROPHOSPHATASE-LIKE 1
12.9228 Ahg485881
15.4919 Ahg922933 minichromosome maintenance (MCM2/3/5) family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression