Detail



ID : Ahg496338

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|496338|fgenesh2_kg.8__2154__AT5G61700.1
Sequence
ATGGTGAATC CTAGTCCAGC AAGTTTTTGG ACGCAAGCCA ATGCGTTACT TAGGAAGAAC TTAACCTACC AGAGGAAACA CATATGGACA AATGTTCGGC TCATCCTGGT TCCACTCTTC CTCTGTTTAA TTCTGCTGGC GATTCAACAA GTGCTTGATG CCTTGATGAA GAGTGTCTCT GATATGTCTA ATTGTGGAGG CAACGTTACT TTGCCTGGTG GTATCTGTCC CATCCCAAAC CCTCCACCGT TGCCTCCGAT GTTGCAGATT CCACAACATG AACTCCGTTC CGTTAAGACC GATTTCTTTT CCTACAAAGA TCTCCCTGAC AAGTCATGCA GAGGAACAGG ATCTTGTCCT GTAACGATAC TTATCACTGG TGATAAACTG GCTCTTGGAA AAGCTTTATC CGCAAATATC TTCAGCACTT CTTTTGTGGT TAATTCCTCC GACCTCTTGC CTACTTTAGC CAATAACGTC TTGGGTTCAA CAGAAGCAGC GGGGGAAGAC AATTATGAAG ACCCGGGGAT TGCCTCAGAT CTCCCTATTT ACAGTATCCA ACCTTCTTGC AGTGCAAACT CTACATGGCC ACTCTCGCTC GGACAAATTC AGACAGCGGT GAAGTGTGTT CAAGGGTTGT GTCTCTGGAG AAATAACTCT GTAGAGGTCA ATGATGAGCT TTTCAAGGGT AGTTGGAGGG GAAACCCTGC GGGGATGACA AATGAGATCG TTGCAGCATA CGATCTCATG AGCACGGATA GGAAAAATTT CAATGTGACC ATATGGTATA ACTCAACCTA CAATGATGAG TTTTCAACTG GTCAGCCTTT AAAGCTGGTC CGAGTTCCCC GCTCTATCAA TCTGATATCA AATGCTTATC TTAAGTTTCT AAAAGGCCTT GGGACAAGGA TATTATTTGA GTTTCTCAAA GAAGTTCCTA AAAAAGAAAC GAAAATGAAT CAAGACATTG CGTCCTTGCT AGGCCCACTT TTCTTCACTT GGGTTGTTCT TCTTTTGTTC CCCGTGATCT TGACATCATT GGTGATGATT TCATATGCCT ATTCTCTCTC CATATATATG TGGTATGTTA TTATCTTTGT CGTTGCTTAC ATATTGGTGT ACGGAACTGG GCTCTTGGGT AGCTTTCTTT TCCAAAAAAT GATTGAAAAT CAGTCATTCC CGGAAGAATG GATTCTTGCC ATGGAGTTGT ATCCCGGCTT TTCTCTGTAC CGCGGGTTGT ATGAGTTCTC GCAATATGCC TCCCGGGGAA ACGGGATGAA GTGGCAAGAT CTCAGTGATA GCGGAATGGG TGAAGTTTTC TGTATCATGT CAATAGAGTG GTTTCTTGCT CTCATTGTAG CCTACTATAT CGATCAGGTT TTCACATCCG GAAAGCATCC TTTCTTTTTC TTGGTGAACC CTTTCAAGAA ACCTTCTTCC CTACCAAGGA GGCCTACTGT GCAAAGGGTG GATTCTAAAA AAGTCTCCAT AGATATAGAA AAACTTGATA TCACTGAGGA GAGGGAAAAG GTTCAAAAAT TGAGGAATGA AGGTAGCACA GGGCATGCGA TCTTGTGTGA CAACCTGAAA AAGGTTTATC CAGGTAGAGA TGGTAACCCG CCAAAAATGG CAGTACGAGG GTTGTATCTC AGCGTTCCTT CAGGAGAATG CTTCGGCATG CTTGGACCTA ATGGTGCCGG CAAAACTTCC TTCATCAGTA TGGTTAGTCT TCATTACTTA TTTTCTTGCT GCGCTGGACA GCTCAGAGTT GGCGACAAAC CTGCTGGTAA TTACAGTGGA GGTATGAAAA GGAGGCTTAG CGTGGCCATA TCGCTTATCG GGAACCCCAA GGTGGTTTAT TTAGATGAGC CAAGCACAGG ACTTGATCCA GCCTCGAGGA AGAATTTATG GAATGTGATC AAGCGTGCAA AACAAAACAC AGCAATAATT CTCACAACTC ACTCGATGGA AGAAGCCGAA TTTCTATGCG ATAGATTGGG AATTTTTGTA GACGGAGGCT TGCAATGCAT AGGAAACTCT AAGGAACTGA AGAGCAGATA CGGTGGATCA TATGTCTTCA CGATGACAAC ATCTTCAAAT CATGAGGAAG AGGTAGAGAG ATTGGTTGAA TCTATCTCTC CCAACGCCAA GAAGATATAT CACCTTGCTG GTACTCAGAA ATTCGAGCTC CCAAAGCAAG AGGTTCGGAT TGCTGAGGTG TTTCGCGCTG TTGAAAAGGC CAAATCATCC TTCACAGTCT TTGCCTGGGG ACTCGCGGAC ACAACTCTCG AAGATGTCTT CATCAAAGTT GCTAGAACTG CTCAAGCCTT CATTTCCTTG TCTTAA 
Length2346
Protein Sequence
Protein Residue
Map Locationscaffold_8: 18926474.. 18930532
Download Sequence
A.thaliana
AGI-codeAT5G61700.1
DescriptionABC2 homolog 16
TAIR curator summarymember of ATH subfamily
Alias[ABCA12][ATATH16][ATH16][ATP-binding cassette A12][ARABIDOPSIS THALIANA ABC2 HOMOLOG 16][ABC2 homolog 16]
Gene coexpression
MR
MR Locus Description
47.392 Ahg949205 transposable element gene
54.3507 Ahg952614 transposable element gene
73.4234 Ahg897853
73.4234 Ahg896508
93.2738 Ahg343150
94.5463 Ahg940106 proline-rich extensin-like family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression