Detail



ID : Ahg496402

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|496402|fgenesh2_kg.8__2218__AT5G62260.1
Sequence
AAGCTCTGGC ATTTCTCTGC TACAGTGTTG GGTTTCAGCT GCAGAATTGT TGAAGAAAGT TTGGTGAATT TCAGGAGCAG AGTTTTTAGA AAATGGAGGA GAAGGGTGGA ATAAGTCCAA GTGGGGTCGT CACAGTTAAG GAAGATGAAG CTTTGGTTCC AAGAACAGAG TTTCAACAAA ACCCTAGCTT TCTCCAATTC GTGAGTCCCA CGACGGTAGT GTCTCCTCTG CCTCTTCCAC CAGCTCCGTC TCCGGCTCCG GTACCAGCCA CCGTGACTCC TGACTCAGCC GCAGCATCGA CCGGATCAGA TCCGACGAAG AAGAAGAGAG GAAGACCGAG GAAGTACGCA CCAGATGGAA GCCTGAACCC TAGGTTTTCG AGACCAACTC TGTCTCCAAC TCCAATCTCA TCTTCGATTC CATTGTCTGG AGATTATCAA TGGAAACGAG GCAAAGCTCA GCAGCAGCAT CAGCCTCTTG AATTCGTCAA GAAATCTCAC AAATTTGAGT ATGGAAGTCC AGCTCCTACT CCTCCTCCTC CTGGGCTCTC ATGTTACGTG GGTGCAAATT TTACAACCCA TCAATTTACT GTCAATGCCG GTGAGGATGT AACAATGAAG GTTATGCCGT ATTCGCAACA AGGATCTCGA GCTATCTGCA TTCTTTCTGC AACTGGTTCG ATCTCTAATG TCACTCTTGG TCAGCCTACC AATGCAGGTG GCACTCTTAC ATATGAGGGT CGATTTGAGA TACTATCGCT ATCTGGTTCC TTTATGCCTA CTGAGAATGG AGGAACAAAA GGTCGGACTG GTGGGATGAG CATTTCTTTA GCTGGACCAA ATGGCAAAAT CTTCGGTGGT GGCCTTGCCG GTATGCTTAT AGCAGCCGGT CCTGTTCAGG TGGTAATGGG AAGTTTCATT GTGATGCATC AAGCAGAACA AAATCAGAAG AAGAAACCGC GAGTTATGGA AGCTTTTGCT CCACCACCGC AACAACCACC ACAACTGCAA CAACAACAAC CTCCTACTTT CACCATAACC ACTGTGAATT CAACTTCTCC AGCGACCGTA GAGGAGCCGA AACAACAACC CTACGGTGGT GGTATAGTGA GACCGATGGC TCAAATGTCT TCTTCTTTCC AAAACGAGAA TTCAACTATG AACAATTTCA CACCGCCCTA TCACGGATAC GGGAATATGA ACACGGGCAC TAACAAAGAC GAACATGAAG ACGACGATGG TGGTGAAGAT GATGATTCGG GCGATACTAG GAGCCAATCT CTTAGTGGTT GAGCAATTCT CGAATCAAAG TCAGAAAGTT TTCTTGTGTA GAAAGGAAGG GAGCTTAAAG GATTCAGCTT TTCTTTGGTT TTTTAGAGGT TTGTTTTAGT TGTGTGAGGG TTTTCTTCTT TTGAGTGTTT TTTCTAATTT CTAGCAGTTT TTTTCTTTCT CTGTGATCGG TTTAGATTTA ATTATGTCGA ATTCATAGAC TAAACGATGT TCTTATTGTT GAGGTCATTG GGATTAAAAT TTAGTAAGAC TATTGT 
Length1546
Protein Sequence
Protein Residue
Map Locationscaffold_8: 19189063.. 19191682
Download Sequence
A.thaliana
AGI-codeAT5G62260.1
DescriptionAT hook motif DNA-binding family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
22.8473 Ahg887627
40.4351 Ahg916656 cytokinin oxidase 2
49.3052 Ahg341402 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
58.0947 Ahg481198 UDP-glucosyl transferase 84B1
64.622 Ahg887586
75.8551 Ahg927998
85.5219 Ahg331055
88.0909 Ahg916472
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression