Detail



ID : Ahg496466

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|496466|fgenesh2_kg.8__2282__AT5G62830.1
Sequence
ATGGCATATT GCGTGGAAAT TTATGAGTTT ACCTCTAATT CATGGAGGAA TCTTGATGCG ATCATTCCCG ATCAGGCCTA CTTAAAAAGT GATGGCCATG CGTGTGCGTC TTTAAGTGGA AATACTTATT GGGTGTCGTG GATTAAAAAA GGAGACAACG ACGACTACTC ACTACTCAGT TTTGATTTTT CAACAGAAAG GTTTCAACGT TTGTGTGCTC CCTTTCATCA TCAACCATGC CGTGTTGATA CTATGGCTCT CTCGGTTGTT AGAGAAGAAC ATCTTTCCTT GTTTTATCAG AGTAGACAGA CACTAAAAGT GGAAATATGG ATGACCGATG AGATTCATAC AACATTTGTG TCGTGGAGCA AGTTCTTAAC ATTAGATTTA GTTTCTCCTT CTTTTTCGAA TTCCATGAGC TTCTATATTG TTGACGAGGA GAAGAAAGTT GTTGTGTGTT GTGTGGAAGA CGGATTTTTC GACTCCAAAT TGGTATGGAT TGTTAGAGAA GGAGAAGAAT ATATACCAGA CTTGCCAGTT TATTATGGCA GACAATCAGT AGGTTTTAGA TCTATTTGTC ATATGCCAAA ATTGTTTGGT TATGTTCCAA AAAATTAG 
Length618
Protein Sequence
Protein Residue
Map Locationscaffold_8: 19462512.. 19463124
Download Sequence
A.thaliana
AGI-codeAT5G62830.1
DescriptionF-box associated ubiquitination effector family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
4.58258 Ahg938330
5.65685 Ahg485290 Expressed protein
11.225 Ahg334843
18.4391 Ahg924350 RING/U-box superfamily protein
18.8944 Ahg315391 Protein of unknown function (DUF784)
22.9783 Ahg936204
27.6043 Ahg913771
32.7414 Ahg940334 VQ motif-containing protein
43.3705 Ahg915726
60.0666 Ahg322693 Defensin-like (DEFL) family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression