Detail



ID : Ahg496468

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|496468|fgenesh2_kg.8__2284__AT5G62850.1
Sequence
ATGACGGACC CCCACACTGC CCGGACGATC GTCGGAATCA TCGGAAACGT GATTTCTTTC GGCTTGTTCT GCGCTCCAAT ACCAACGATT ATGAAGATAT GGAAGATGAA ATCGGTGTCG GAGTTTAAGC CAGATCCATA CGTCGCTACA GTTTTAAACT GCATGATGTG GACATTTTAC GGACTTCCTT TCGTCCAGCC CGACAGTCTC CTCGTCATCA CCATTAATGG AACTGGTCTT TTCATGGAAC TCGTTTACGT CACCATCTTC TTTGTCTTCG CTACCTCCCC TGTCCGCAGA AAGATCACAA TAGCTATGGT AATCGAGGTG ATATTCATGG CGGTGGTGAT CTTCTGCACA ATGTATTTTT TGCATACAAC AAAGCAGAGA TCTATGCTTA TTGGGATCTT GTGCATTGTT TTCAACGTCA TCATGTATGC TGCTCCTCTC ACCGTCATGA AACTTGTGAT AAAGACAAAG AGCGTGAAAT ACATGCCGTT CTTCCTGTCA TTAGCCAACT TCATGAACGG TGTCGTTTGG GTCATTTATG CATGTCTTAA ATTCGACCCC TATATTTTGA TTCCAAATGG TCTTGGATCG CTATCAGGAA TAATCCAGCT TATATTATAC ATAACTTACT ATAAAACAAC TAATTGGAAC GATGAAGATG AAGATAACGA AAAGCGCTAT TCGAATGCTG GAATCGAACT TGGCCAGGCT TGATAATTGC AGCTAGCTTC ATCGTCGACG GTGCTTCATC GATAGGTTAA GATAGAATCA GAAGTGAGGT GAAGTTCTTA TTACTATTAT TATGTGGAAG CTTATGAAGA AAAAAAATGA AAAAGTGGAA CCCCAAAGTT ACGAAGTTTT TTTTTGTTGG AATGATTATA ACTTTCGCAA GTTGAATCTA TGTAATTTGT TACAATTTTA GTTTTAATCG AAGTTTATTA GATTACTTT 
Length959
Protein Sequence
Protein Residue
Map Locationscaffold_8: 19480957.. 19482522
Download Sequence
A.thaliana
AGI-codeAT5G62850.1
DescriptionNodulin MtN3 family protein
TAIR curator summaryEncodes a protein that is expressed in vegetative cells of pollen.
Alias[AtSWEET5][AtVEX1][SWEET5][VEGETATIVE CELL EXPRESSED1]
Gene coexpression
MR
MR Locus Description
4.89898 Ahg901002 low-molecular-weight cysteine-rich 76
7.28011 Ahg914952 Disease resistance protein (TIR-NBS-LRR class)
9.38083 Virus0614
9.38083 Virus3746
11.4891 Virus0535
13.2665 Virus1084
30.3315 Ahg919690 Plant invertase/pectin methylesterase inhibitor superfamily protein
37.2827 Ahg946938 Ankyrin repeat family protein
46.7974 Ahg350449 SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein
47.6235 Ahg475002 Defensin-like (DEFL) family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression