Detail



ID : Ahg496536

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|496536|fgenesh2_kg.8__2352__AT5G63490.1
Sequence
AATCCATTTG TTGACCCGAC GAATTTCGTC TGTAGAAATG GCTAGCCAAG GCGGGTCATC AAGACGGAGC TTATCTGTTA CGACTGCGTC ATTGCACGGA AAGAAGAAAT CCATGGATAT CGGTGAACGA GGTCCCGACA CTGGCCGGAG ATCTCTTACT GTTTCTCGTT CTCCTTTGGG TTTAACAGGA GGCGAGCGAA CTGTTAAACG GTTAAGGCTT TCGAAAGCTC TTACAGTACC AGCAACAACA ACTATTTATG AAGCTTGTAA AAGGATGGCT TCACGACGAG TTGATGCTTT GTTGTTGACT GACTCTAATG AAATGCTCTG TGGGATTCTT ACTGATAAGG ACATAGCTAC AAGAGTGATT TCACAGGAAG TTAATGTCGA GGAAACACCT GTATCCAAGG TTATGACGAA GAACCCAATG TTTGTTCTCT CTGAAACACT TGCTGTTGAA GCCCTCCAAA AGATGGTCCA AGGAAAATTC AGATATCTGC CTGTTGTTGA AAATGGCGAA GTTATTGCTT TATTAGATAT AGCAAAGTGT CTGTATGATG CGATTGCTCG TATGGAGAGG GCAGCTGAGA AAGGTAAGGC AATAGCTGCT GCTGTTGAAG GTGTTGAAAA AAGTTGGGGG ACAAACACTT CAGTTCCCAA CACTTTCATT GAAACGCTAC GAGACCGGAT GTTTAGACCT TCTTTATCAA CAATTATACC AGATGATACA AAGGTTCTGA AAGTCTCACC GACAGACACA GTGTTGACTG TAGCAAAGAA GATGGTTGAA TTTCAATCAA GCTGTGCAGT CGTGATAATC GAGGACAAGC TTCGAGGGAT ATTTACTTCC AAGGATATAC TGATGCGGGT TGTGGCTGAA AATCTTTCTC CATCTGAGAC TCTAGTGGAA ACGGTTATGA CTCAAAATCC AGAATCTACG ATAGTTGACA CACCAATTGT TGAAGCTCTG CACATCATGC ACGAGGGAAA ATTCTTACAC CTTCCCGTTA CTGACAAAGA AGGAGATGTA GTTGCAGTTG TCGATGTAAT CCATGTCACT CACGCGGCTG TTGCCACAGC TGGAACTACT GCGGGAATAG GTAATGAGGC GACAAACACA ATGATGCAAA AGTTTTGGGA TTCAGCAATG GCATTGTCTC CTAATGAGGA CGATGAGGAC TCGAGAAGTG AGAGCTCCAT GAAAGTTGCT TCCGAAGCTG AGACAGGAAA ATCTTTCCCT TTTGCAAATA CATTTTCGTT CAAGATTGAA GACAAAAAGC ACAGAAAACA CAGATTCATA AGCGACACTC GGAGTTTGAC AGAGGTGATA ACCGCGATCA TTCAGAGGGT AGGGGATGAT ATCGATCCAG ATAACTTACC CCAAATTTTG TATGAAGACG AAGACCATGA TAAAGTGTTG TTGGCTTCAG ATAGTGACCT TCAAGCAGCC ATAGAACATG CAAAATCAAT TGGCTGGAAG AGTCTCAGAT TACATTTGGA TGATTCAAGA GAAGGCAAAG GAAGAAGAAG GAGAAGAGCA TCAGGATCAG CAGAATCAAT GGAGTATGTA GAGACAGACG CTTGGGCTGC TGCTTATAGT GGAGTTGCGG CTGGTGCAGC ATTAGTAGCT GGTCTTGGTT TTATGGCCTT TCTCAGAAAA TTCGGTCATT GATTCCTCAA AATCACTACA AAAAGTGTTT CTTTAACAGA ACAATACAAA CAAAAAAAAA AAGAAAAACA GACACAGATT TTGAAGGTTT TGTCTGAAAT ATTTTTATAT ACAAA 
Length1785
Protein Sequence
Protein Residue
Map Locationscaffold_8: 19716180.. 19719898
Download Sequence
A.thaliana
AGI-codeAT5G63490.1
DescriptionCBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
16.1864 Ahg481974 BTB/POZ domain-containing protein
28.2843 Ahg904152 RNA binding (RRM/RBD/RNP motifs) family protein
30.9354 Ahg484196 Galactose oxidase/kelch repeat superfamily protein
31.749 Ahg476653
32.8786 Ahg477807 RING/U-box superfamily protein
34.4819 Ahg482284 RNA-binding (RRM/RBD/RNP motifs) family protein
60.0666 Ahg926898 Sec14p-like phosphatidylinositol transfer family protein
62.3458 Ahg474191 scarecrow-like 5
66.453 Ahg488204 pheophytinase
73.2666 Ahg487051
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression