Detail



ID : Ahg496578

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|496578|fgenesh2_kg.8__2394__AT5G63880.1
Sequence
TTGGTTTGAA ATTGACGACC AACATCTTTC GGAAATCTAG AAACTTTCTG CTCGTAAGTG AAGAAAAGAT GGGAAATTTG TTCGTGAAGA AACCACAGAT CACGGAGGTT GATCGAGCGA TTCTCTCTCT CAAAACCCAA AGACGCAAGC TTAGTCAATA TCAGCAAAAG CTTGAGAAAG TAATTGAAGC CGAAAAGCAA GCTGCAAGAG ACTTAATCCG CGAGAAGCGA AAGGACAGAG CTTTGTTAGC ATTGAGGAAG AAACGAACCC AAGAAGAGTT ATTGAAGCAA GTTGATCAGT GGGTCATCAA TGTTGAACAA CAATTAGCAG ATATTGAACT TACGAGCAAA CAAAAGGCTG TGTTTGAGAG CTTAAAGCAG GGTAATAGTG CTATTAAGGC CATTCAAAGC GAGTTGGACC TTGATGATGT TCAAAAACTT ATGGATGATA CTGCTGATGC TAAAGCTTAT CAAGATGAGC TGAATGCTAT TCTGGGAGAG AAGCTATCAG CAGAGGATGA AGAAGATGTA TTAGCAGAAT TTGACAACCT AGAAAGTCAG CTTATTGTTG ATGAGATGCC TCAAGTGCCT ACGAAGGAGT CCGAAGAATC TGACAAGCTG GATCTTCCGG ATGTGCCAAC AAAAACTCCT GTCGCTTCCA ATGCAGAAAT CACACCAGCT GAATCCGCCA CAAAAACAAA AGTTCTCGAA GAACCTTTGC CGGCTTGAGC TAGAAGAAAC TGATCAACAA GACGATTTCA TCATTCTTTT AGCACTTTTT TTTTTCTTTA TTGTGCTCTT TGAAGTTTTC TGTGTAAACC GTTTGTAAAG AACAAGATAT ATTTGGAATC CCATTGTGT 
Length859
Protein Sequence
Protein Residue
Map Locationscaffold_8: 19921966.. 19924567
Download Sequence
A.thaliana
AGI-codeAT5G63880.2
DescriptionSNF7 family protein
TAIR curator summary
Alias[VPS20.1]
Gene coexpression
MR
MR Locus Description
30.2655 Ahg484153 SNARE associated Golgi protein family
36.7423 Ahg471968 nuclear factor Y, subunit A8
41.4729 Ahg934312 UDP-Glycosyltransferase superfamily protein
52.2494 Ahg496904 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein
54.074 Ahg482689
67.2458 Ahg901621
68.2129 Ahg492640 Alternative oxidase family protein
70.746 Ahg493134 Protein of unknown function (DUF1639)
78.4857 Ahg477924 F-box family protein
80.5543 Ahg473593 C2H2 and C2HC zinc fingers superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression