Detail



ID : Ahg496739

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|496739|fgenesh2_kg.8__2555__AT5G65160.1
Sequence
GAAACGGAAG AATCTTCGTT CCTCTTTACC GTCCGGCCGA GAAAAGCCTA ATCACATCTT TCTTCTCTAT TCCTCTTTTT AAAACATGAG ATCTCTCTCT TCTCATCACC ATTGATCTCT GGTTTTCTAA ATCTCTTCTT CTGATTCTTA TTCTATTTCT GAATTTTGAT TTGTTCTTTG GGAGGGAGAG GGTTTTCTAA TTCCGAGGCC GGTTCTTGAG ATGGAGGAGA ACACGGCGGT GGCTGCGGCG GAGAGAAGAT CAGGTTGCGG GTTATTGAGT GTAATGTTTG GTAGACGTGG CTTGTGGTCC AAGAAATCTA CCGCGGCCGA TAACGGTAGC CAGAAAAGCA CATCTACGGC TGCGACCGCC ACAAGCAACA TTCAATTCAC TAAATCTCCG GGCACCGAGT TAAAGAAGCC TCGTGATGAT CAGAAGGTTT CCGCTGAGCC AATCCAGAAT AACAAGATCC AGAACCAACA AAATCACAAC CAGAGATCCG TAGTTCCATC AAAACCCTCG TCGAATCAAT ACCCTAATAA CCATCAATTA GGGAGTTACG AGAATCACCA ACGAAGTAGT TATAACAACA ATAGTAATAG CGTTGATCCA TATCGAGGAG GACAGAGGAA AGTGCCAAGA GAAGCCATTG GTTTATCGGG TGAGCTTGAA AGCATGATTA CGGATCATCA GAAAGCAAAA GGAACCAGTG GATTGGTTCG TGCTTCTTCT AGCAATGTCA TGTTATATGG TAATCTTGGC AATTTGAATC AGACCGGACC AGTAACGGCT GGTGTAAATT ACGGTAATAA CAATGGATAT GGCGTGAAGA GGGCGACTAT GGGGGATGCA ACGGGGACGA CAACAAAGAG TCAAGATCAA TCAGGATCTT TGTGTAGAGC AATCTCAACA CGAATGGATC CGGAAACGTT AAAGATCATG GGGAATGAAG ATTACAAGAG CGGGAATTTT GCAGAGGCGT TAGCATTGTA TGATGCTGCC ATTGCGATTG ATCCCAACAA AGCTGCGTAC CGTAGCAACA AGAGTGCGGC TTTGACCGCG CTAGGGAGAA TCCTTGAAGC GGTTTTTGAA TGCAGAGAAG CAATCAGAAT TGAGCCTCAT TACCATAGAG CACATCATCG ATTGGGTAAC TTGTACCTCA GGTTAGGAGA AGTGGAGAAA TCGATATATC ATTTCAAACA TTCGGGTCCA GAAGCTGATC GCGAAGACAT TGCAAAGGCG AAAACGGTAC AGACACATCT CAACAAGTGC ACAGAAGCTA AGAGATTACG AGATTGGAAT GGTTTGATTA CAGAGACAAC AAACACAATC TCTTCAGGAG CTGATGCAGC CCCTCAGGTC TATGCATTGC AAGCAGAAGC CTTGTTGAAG ACCCATAGAC ATCAAGAAGC GGATGATGCA CTGTCTAGAT GTCCGGTTTT CGATGGGGAC ACCAGCACTA GGTACTATGG ACCGGTCGGT TATGCTGGTT TCTTGGTCGT CCGTGCTCAG GTTCACTTGG CCTCTGGCAG ATTCGACGAA GCAGTGGAAG CGATCCAACG CGCCGGAAAG CTGGACGGGA ATAACCGAGA GGTGATGATG GTTTCACGAA GGGCACAAGC GGTGACTGAA GCTCGATTTA AAGGAAACGA GCTGTTTAAA GCCGGGCGGT TCCAGGAAGC GTGCATTGCT TATGGTGAGG GACTAGACCA CGATCCACGA AACTCCGTTT TGCTCTGCAA CCGCGCGGCT TGCTGGTCAA GATTAGGTCA ATTCGATAAA TCTATTGAGG ATTGCACGGC GGCGCTTTCC GTTCGGCCGG GATATGGCAA GGCTCGCCTC AGAAGAGCCG ATTGTAACGC CAAGATCGAA AAGTGGGAAT TAGCGGTGGG TGACTATGAG ATATTGAAAA AAGAGTCGCC GGAGGATGAG CAAGTTACCA GAGGATTAGC AGAGGCTCAA CAACAACTCA TGAAACGTCG TGGATAAGAC TCTTGAGAAA TTTTCCGGTG ATTAAGAACC ACTGTGGATA TATGGAGGAA TAGTCCTTGT TTGATTTTTT TTTATGACAA ATTGTGTGAA TTCTTTCATT TATATTTTTT TTTTGGGTTT GAATGATTAA ATTGTTTGTA TAGGAATGAG ATTGTGGGAA TACT 
Length2154
Protein Sequence
Protein Residue
Map Locationscaffold_8: 20474380.. 20477088
Download Sequence
A.thaliana
AGI-codeAT5G65160.1
Descriptiontetratricopeptide repeat (TPR)-containing protein
TAIR curator summary
Alias[TPR14][tetratricopeptide repeat 14]
Gene coexpression
MR
MR Locus Description
22.4944 Ahg936695 plastocyanin-like domain-containing protein
31.3209 Ahg351609 Protein of Unknown Function (DUF239)
37.3898 Ahg945635 isopentenyltransferase 4
57.0263 Ahg323966
65.7875 Ahg478955 Serine/threonine-protein kinase WNK (With No Lysine)-related
66.7458 Ahg921700 ENTH/VHS/GAT family protein
70.6965 Ahg316947 Pectin lyase-like superfamily protein
74.9266 Ahg481664 transposable element gene
75.233 Ahg943595 copper ion binding;electron carriers
88.6905 Ahg477013 Terpenoid cyclases family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression