Detail



ID : Ahg496989

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|496989|fgenesh2_kg.8__2805__AT5G66210.2
Sequence
AAAAGGGGGA AAGTGAGAAG GATCTTTCCT TGGGGCTCCT CCAAGTCCAG GAGGAGGGGT TCACTCGGCT CTTTGGGTTT GACCAACTCA ACTCTCTTCT AATCTTCTCC TTCCTCTCAT CTTCTTCTTC TTTTATTAAT AATCCCTTTT CTAAAGTTCT CATCTCGATT CAGAGCCATG GGTGTCTGTT TCTCCGCCAT CAGAGTCACT GGTGCCAGCA GCAGTAGACC AAGCAGTCAG ACCAACAACC CCAAATCCAA GGCTGCTCCT TCTCCCATCG ATAACAAGCG CCGAACCGGC TCCATCCCCT GCGGCAAGCG TACTGATTTT GGTTACGCCA AAGACTTCCA CGACCACTAC ACCATCGGCA AATTGCTCGG CCATGGTCAA TTCGGCTACA CCTACGTCGC CATCCACAAA CCCAATGGAG ATCGCGTCGC CGTTAAGAGA CTCGATAAGA CTAAGATGGT TCTTCCTATT GCGGTTGAGG ATGTCAAGCG TGAGGTTCAG ATTCTTATAG CTCTTTCTGG CCACGAGAAT GTTGTTCAGT TTTACAATGC CTTTGAGGAT GACGATTACG TCTATATTGT TATGGAGTTG TGCGAAGGAG GCGAATTGCT GGATAGGATT TTATCCAAGA AAGGTAATCG ATACTCCGAG AAAGATGCAG CCGTTGTCGT TAGGCAGATG CTCAAAGTCG CAGGAGAATG CCATCTTCAT GGTCTTGTAC ATAGAGATAT GAAACCAGAG AACTTTTTGT TCAAATCAGC TCAACTAGAT TCGCCTCTAA AGGCTACAGA TTTTGGTTTA TCGGATTTTA TCAAACCAGG GAAAAGGTTC CATGACATTG TTGGTAGCGC CTATTATGTT GCTCCCGAAG TACTAAAGCG CAGATCAGGG CCTGAATCAG ATGTGTGGAG CATTGGTGTG ATTACGTATA TATTACTTTG TGGGAGGCGG CCTTTTTGGG ATAGGACAGA AGATGGTATA TTTAAGGAGG TTTTAAGAAA GAAACCTGAC TTCAGCCGTA AACCATGGTT AACTATAAGC GACAGCGCCA AAGATTTTGT GAAAAAGCTA CTTGTAAAAG ACCCACGAGC ACGGCTAACT GCTGCACAAG CCCTATCACA TGCGTGGGTT AGAGAAGGTG GGAATGCTAC TGATATCCCT GTCGATATTT CAGTTCTTAA CAACTTACGT CAATTTGTGA GATACAGCCG TCTAAAGCAA TTTGCTTTAA GGGCGCTTGC TAGCACACTT GACGAGGCAG AGATCTCTGA CCTCAGAGAT CAATTTGATG CGATTGATGT GGATAAAAAT GGTGTCATCA GTCTTGAAGA GATGAGACAG GCACTTGCCA AAGATCTTCC TTGGAAACTG AAGGATTCAC GAGTTGCTGA GATCCTTGAA GCGATTGATA GCAACACTGA TGGGTTAGTG GACTTCACAG AGTTTGTAGC AGCAGCTCTA CATGTTCATC AACTGGAAGA ACATGATTCA GAGAAATGGC AGCTAAGGTC AAGAGCAGCT TTTGAGAAAT TTGACATTGA CAAAGACGGG TACATAACGC CTGAAGAACT TCGAATGCAC ACGGGGTTAA GAGGATCAAT AGATCCACTG CTGGATGAAG CAGACATTGA CAGAGATGGG AAAATAAGCC TGCATGAGTT CAGGAGACTT CTAAGAACAG CGAGCATAAG TTCACAGAGA GCTCCAAGTC CTCAAGGCCA CAGGAATCCT CGGTAGTATA TACTAGAAGA GGTTGATAAG TAAGTAAGTA CTTAGGTTGT TTAAGGGCAG CCAAACCAAA GAGAGAAAGT GGAGTGAGAA CTGTCCATTG ATGAAATACG AGAGAGCTCT TCTTCTCTAC TAGTAGATGG AGGAGGCCAC GTGGAATTCT CTGAGTGGGG GCCGAATCCA AATTTAATAA TGGTTGGGCA CCACCAAAGA AACATAGAGA GCCAGCTGTA ATTTCGATTC TACCATATAT ATTTGGTCTG TTTCCATATT TCTTAGTATA ATATTCGTTT TGAGAGCACC 
Length2040
Protein Sequence
Protein Residue
Map Locationscaffold_8: 21463605.. 21466918
Download Sequence
A.thaliana
AGI-codeAT5G66210.2
Descriptioncalcium-dependent protein kinase 28
TAIR curator summarymember of Calcium Dependent Protein Kinase
Alias[CPK28][calcium-dependent protein kinase 28]
Gene coexpression
MR
MR Locus Description
8.12404 Ahg495700 RNA-binding KH domain-containing protein
8.3666 Ahg892011 RING/U-box superfamily protein
14.2829 Ahg492373 ubiquitin-associated (UBA)/TS-N domain-containing protein / octicosapeptide/Phox/Bemp1 (PB1) domain-containing protein
16.1555 Ahg478682 multidrug resistance-associated protein 3
17.1464 Ahg950552 exocyst subunit exo70 family protein B1
22.8035 Ahg490469 Ubiquitin-like superfamily protein
22.8473 Ahg318458 calmodulin binding;transcription regulators
25.593 Ahg941351 apyrase 2
26.8328 Ahg340965 Protein of unknown function (DUF1423)
27.9285 Ahg470078 SEC7-like guanine nucleotide exchange family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression