Detail



ID : Ahg497075

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|497075|fgenesh2_kg.9__40__AT4G05505.1
Sequence
ATGAAGACTC GTGGTGGAAA AGGCAAGAGA GGAAGGGGAT CGAAGATTCC CCCCCCCCCC CAAAATCGAC CCACTTCTTC CCAGCCTGTA CGAGTTGAAT CGAAGACCTT GAATCGAAGA CCTAGGGGTC TTCCCAGCCA GTACGAGTTC ACGCCGGCGA ATCGTCAAGC CCCACTTCAA GATTCTGAAC AAGAGCCGAT TGCACAACCT CCAACGGGTC CAACCATCAG GGACTATCCT CCTCCGACGC AACTTTTCCA GTCAGGCGAA GGATCTCCTC GCGGATCTGG CTCGACTCCA TTTCGAGCAT CTGGATCGAC TCAACCTAGA TCTGGAGGAT CTCGCCGGTT CAACGGGAAG CCTACAATCA GTCTACAGCG CCGGATCAAC GGGAAGCCTC CAATCAGTCT CCAGCGCCGG TTCAACCGGA AGCCTCCAAT CCTCCACCTC GGCAGGCGTC AAATCCTCCA CCTCGAGCCT CTGTATCACA TCACAGCTCT CAAGCTCAAA ACTCACATGC GGAAGAAGAT GAAGATGAGG AAGCTGAGGC TGATTATGAA AGGGAATCAA CTCTCCCTGA AGATTCGCTT GCTACTCTCC ATGAGTTGCT TCTCCGGCCA GGACGTGAGA AGTATACAAC GGTCATCTCT CCCACATTTG AGCCTGAAAC CTATTGGTAA GCTGAGTAGA TTAGGTTTAG GGTTAATATT GAGTAATGTG TGTGTGTATC TGCTAAGTAG ATTAGGTGTG TATATGGTAA GCTGAGTATA TTAGGTTTAG GGTTAATATT GAGTAATATG TGTGTGTATG GTAAGCTGAG TAGATTTGTA TAAAGCTTGC TAATTGGTTT ATGTAATTGT AGGTTTGGTC ACGACAATGG TAAGCTGACC CGGAAGATCA CAAAGGTATT CACAAACAAG TTTAATGGAC CATATTACAA TTGGAGCTGT GTACCTACTG AAAGAAGACA CAAATACTTC CTCGAATTCG CGGTAAATTA ACTTCTATTG TCTGTATCCA TTTGGTTTGG TTTGGTTGTT TGATCACTAA CATCAAACTC TCCTCTTGTT TTGTAGAAAA CACACACATG GCATCCATCA CTGACCGGTG TAATTGAAGA GAAATTCTAC AAAATATGTC AGCTGCGTAT GAAGGACATG GTTTCTAAGG CTTGCTCAAA ACGAGCCACT GAGAGACCGC CATGGATTGA GAAGACATTG TGGAAGGAAA TGTGTGAGTA TTGGGACACA GAAGAAGCAC TTGCCAAGAG TTCAACCACA TCAGCAGCTC GAATGTCTGA CCGTAATGGT CTTGGTCCTC ACAAGCATGT ATCGGGGCCA AAGTCTTTCT TACAAATCGA GCAAGAGATG GTAAGTTACA TCAAGCACTC TTGTTTATTT ACATAATGGT TTTCCTTAAG AATTTGAATT TTTTTGTGAA CAACATTTCA GGAAATTGAG CTGGGAAGAC CACCTACTAT TGGTGAGATA TTCATTAGGA CTCATACCAA AAAAGATGGG AGTTTTGTTG ATAGGAAGGC GCAGGAAATT CATGAGGCAT ATTTGAAGAA CAAGGAAGCT AAGTTGGCTG CCCTTGTGAA TGATGAAGGG TCTGATGGTA CATCCCGTCG ATCAGAACTA TCTCAAGAGG AGGATGATGA GATCTTCCTT TTGGTAATGT TTTTTTATTA TTATCACTTA CTTCATCTTT TAAGAACTAA TCCTCTTGTT TTTTTTTTGC AGTCAACTGT CACAAACGAG AGAGGGGTAT ACTTCGGAAT GGGAAGCTTA GGGAGGTACA TCAATGGGAA GCGGAAGTAC CCAGGAAGCA GTTCTGCTTT CACTTCCTTG CAGTCACAGC TTGAGGAAGC CAACCGCAAG ATAGAAGAAC AAGCGACTCT CCAAGCACAT CGGGAGGCAG AGGCATTGCG GGTGAAAGCT GAGCAAGCAG AGATCAAGCG TGTTGCTAAT GAGCAACAAG CAGAGATCAA ACACTTGAGC ATGGTGAAGA AGTACTTGAC CGAAACTGAC CCCAAGTTTC TCGCCTTCCT CGAGTCTGCT 
Length2060
Protein Sequence
Protein Residue
Map Locationscaffold_9: 735524.. 737641
Download Sequence
A.thaliana
AGI-codeAT2G12420.1
Descriptiontransposable element gene
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1.73205 Ahg917658 subtilase 4.13
2 Ahg947612
3.4641 Ahg900378
3.4641 Ahg487408 C2H2 and C2HC zinc fingers superfamily protein
7.07107 Ahg951906 MATE efflux family protein
8.12404 Ahg926663 phospholipase D gamma 2
9 Ahg900078
9.53939 Ahg487283 Plant invertase/pectin methylesterase inhibitor superfamily
9.94987 Ahg950383 Auxin efflux carrier family protein
11.6189 Ahg919270 Pectin lyase-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression