Detail



ID : Ahg487408

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|487408|fgenesh2_kg.6__542__AT5G06070.1
Sequence
AAATCTTACA TATGATGGAG AGAGGAGAAT GCTTGATGTC GATGAAGCTT AGACCGATGG TTACGAGGCC ATCTTCGGAT GGGACATTGT TTTGGCCGTT TAGGGAAGAG AGAGCGTTTG CGTCAGCTGA GGAGTATGGC GGTGGAGGCG CTTGCATGTG GCCGCCGAGG TCTTACTCGT GCAGCTTTTG CGGGAGAGAG TTCAAGTCGG CGCAAGCACT AGGCGGTCAT ATGAACGTTC ATCGAAGAGA CCGAGCTAGA CTCAAACAGC AATCATTATC ACCTTCATCA ACTGACCAAG CCACACATCC TGAATATGAT CGTCAACAAC AAGTTCTTGA TGTGGGGTCA AAGGTTCTCG TCCAAGAAGA AACAAGAAAG CCTAATGGAA CTAAAAGGGA GATAAGTGAT GTTTGTAATA ATAATGTTTT AGAAAGTTCT ATGCAACGAT ATGAGCATGA CAATGATGAA GTCAAGACTG ACTTGTCAGT CGGTCTACTA AGTTCTGAGT TTGATCCTCG GAAGAAACAA CTAATCAAAG GATCATCTTC ATCATGGAAG AGGGCAAAGA CGGATGTGGC AAGATTTCCG ATGATGTTAG GGTTGGTCAT TGGAGTTTCC AAGATCAACG GTCATCATGA GGAGTTGGAT CTTGAGCTAA GGCTAGGAGC TGATCCGCCT AAGGTTAACT AGCTTAAGTA ATTAAAAAAG TAATAATAGT TAATGTGATT GCCAAAAAGA AGAAGTTAAA CTGTCTCTAA TCTCAAGAGT GAAACGAGAG TAGGTTCTGT AGTGTTGGCT TTGATATAGT AATATTTTTA TCTTATGGAA AAAGTCAACA CGTATAGTCT TTGCTCTAAT TCATAAGACA ATCTAAATAT TTTTTACGAA TGATGTAACT TTCTCACGAT TTGGTTTTCA ATATTTATGC CTAT 
Length934
Protein Sequence
Protein Residue
Map Locationscaffold_6: 2150072.. 2151020
Download Sequence
A.thaliana
AGI-codeAT5G06070.1
DescriptionC2H2 and C2HC zinc fingers superfamily protein
TAIR curator summaryIsolated as a mutation defective in petal development with specific effects on adaxial petals which are filamentous or absent. Encodes a Superman (SUP) like protein with zinc finger motifs. Transcript is detected in petal primordia and protein is localized to the nucleus.
Alias[RAB][RBE][RABBIT EARS]
Gene coexpression
MR
MR Locus Description
3.4641 Ahg497075 transposable element gene
10.3441 Ahg480366 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
13.1149 Ahg942130 Leucine-rich repeat (LRR) family protein
14.8324 Ahg932829
18.9209 Ahg337776 plant glycogenin-like starch initiation protein 4
19.0526 Ahg897475 Glycosyl hydrolase superfamily protein
19.1311 Ahg496695 O-Glycosyl hydrolases family 17 protein
19.3649 Ahg890578 HSP20-like chaperone
20 Ahg484770 TAPETUM 1
20.2485 Ahg493352 HXXXD-type acyl-transferase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression