Detail



ID : Ahg497170

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|497170|fgenesh2_kg.26__5__AT5G24050.1
Sequence
ATGTATTACG ATGAGGTTCA TCTCACGGCT TCAGGGAAAG GCATGTGGTT GAATTTATGT GTACTGGTTG ATGCGGTGTT ATGTTATATG AAGAAGAACA ACGTCGTACG ACTGTCTCTG AAGAAGAAGC AGAAAGCCAG AAGAGAATCT TTTAGACAAC AAAAGCTTAA TGGGTTTTTA ACTTCTACTT CTTCATCGCT TATCGATATT AACCAGTTCC CTACTGATTC TGAGACAGAA CAAAACCATC TTCAGTTGCT ATCTTCTTCA TGTTTCATCC CCGCTGATTC CGAGACGAAA ACACTACAAA ACCTAGTTCT GACTCTTATG GCTGAGTCCG AGGAGAGGGA GACGAAAGAC CCACAAAATC CTAATTCCCA ATCTTCTATG TCTTTGTGCC TAACGGAGAA CACAAGCCGC AAGAGACGTG CTGTGGAACA GAGGAAGCGT ACTGGTGGAG TCAAGAAAGC AAAGGTTGCT CCTTCTTCAG GGACAGCGAG AGAGACGCCT GAGTGGCTTG TCAAGGTGAT GAGAGACATG AAAGAAGTTA AAGACGCTAA ACTGATATTT GAGAAGACTC TGTTCGTGAC TGATGTAAAC CCAACACAGA ACCGTCTCTC AATGCCTTTC AACAACTTAA TCCGAAACGA TTTCCTGACG TCTGTGGAGT CCATAATCAT AAACGAAGAC ATCAACAATA ATAAGAAGAT TGGAGTGGGA GTGATTCTCG TGGATCAACG CTGGAATTAC AATTTAATTT GTGGGTGGAT CGATGTCGTT GATGCTAACG GATTGAAAGA CGGTGACAAC ATTAGTCTTT GGTCGTTCAG GTGTTGTGGA GTCCTCTGCT TTGCCATGGA ACTGAGTAGC TCTTCTCTTG CTCTCTGTGT CTGCTAA 
Length897
Protein Sequence
Protein Residue
Map Locationscaffold_26: 131527.. 132522
Download Sequence
A.thaliana
AGI-codeAT3G25182.1
Description
TAIR curator summaryPseudogene of AT5G24050; DNA binding protein
Alias
Gene coexpression
MR
MR Locus Description
11.4018 Virus1136
13.1149 Virus0366
13.7477 Ahg344002
14.6629 Ahg949680 Prolyl oligopeptidase family protein
19.2094 Ahg927656 Protein of unknown function (DUF784)
22.7156 Virus0924
24.5357 Ahg914863
28.1425 Ahg951478 root hair specific 19
30.6757 Ahg313252
30.7409 Ahg935354
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression