Detail



ID : Ahg497182

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|497182|fgenesh2_kg.39__2__AT2G47860.1
Sequence
ATGGGTGTTG TTACTGTTCC TGAGTCTAAG CAAAGTGTTG CTGCTAAAAG AGCGTTTCGT CCAAGTTCCA GCATCAGACA CACTCCTCAA TGGCCTGTCT CGGACGTTAC GAGTGACTTA ACCATCGAAG TCGGCTCTGC CAGCTTTTCC CTTCACAAGT TTCCCCTCGT CTCTCGGAGT GGAAGAATCC GGAAACTTGT TCTGGAATCA AAAGACAAGA ACCTTAACCT AGCCGTAGTT CCAGGCGGCT CAGAATCGTT CGAGCTCGCT GCAAAGTTCT GCTACGGCGT CGGCGTCCAA TTCAACTCGG CCAACATTGC GGCTTTGCGG TGCGTGGCTC ATTACCTTGA GATGACAGAA GAGTTGTCGG AGAAGAACCT GGAGGCGAGA ACAGAGGCCT ACCTCAAAGA CTCCATCTTT AATGACATTT CGAATTCGAT CACTGTTCTT CACTCCAGCG AGAGGCTACT GCCTGTAGCT GAAGAGATCA ACCTCGTCGG GAGGCTGGTC AACGCAATCG CTGTAAACGC CTGCAAAGAA CAGCTAGCCT CTGGTTTGCT CAAGCTTGAT CAGAATTTCA GCTGCGGCGT GCCGGAGACT GAGAAACCTT GTGACTGGTG GGGGCGCTCT CTTCCCATCC TCAAGCTCGA TTTCTTCCAG AGAGTTCTCT CCGCCATGAA ATCCAAAGGT CTCAATCACG ACATTATCAG TGACATCCTC ATGAGCTACG CTCGCAAGTC ACTGCAAATC ATCAGAGAAC CGAGTCTCGT CAAATCAGAT TCCGATCTGC AGAGGAAACA GCGAATCGTC CTTGAAGCGG TCGTGGGGCT CCTCCCAACG CAAGCGAACA AAAGCTCAAT TCCGATATCG TTCCTCTCTA GCTTGTTGAA GACCGCTATA GGATCTGGAA CCTCCGTCTC TTGCAGATCG GATCTGGAGA GACGGATCAG CCACCAGCTC GACCAGGCGA TCCTGGAAGA CATCCTTATT CCGGCGAACA TGGGCGCCAT GTACGACACC GACTCGGTGC AGAGAATCTT CTCCATGTTC CTGAACCTTG ACGAGTGCGA CTACAGAGAT GATGACGACG ACGAGGACGC TGGAGATGCG GTGGACGAGA GCGAGATGGC GATTTACGAT TTCGAGGGGG CTGAGTCTCC GAAACAGAGC TCCATCTTCA AGGTGTCGAA GCTGATGGAT AGTTATCTCG CTGAGGTGGC TCTCGACTCG AGCCTCCCTC CCTCCAAATT CATAGCTCTC GCAGAGCTTC TCCCTGACCA TGCTCGCGTC CTCTGCGATG GTCTCTACCG AGCCGTTGAT ATCTTCCTCA AGGTTCATCC CCACATGAAA GATTCAGAAC GTTACCGTCT CTGCAAGACA GTCAGCTGTA AGAAACTGTC GCAGGACGCA AGCAGCCATG CGGCGCAAAA TGAGAGGCTT CCGGTTCAGA TTGCTGTTCA AGTCCTGTTC TACGAACAGA CACGGCTCAA GAACGCCATG ACCAGCGGCG GTGGCACGAG CCAAAGCCAG TTCTTCTTGT TCACAAACCG CTCGGGAAGC GGGATGGCAA GCGGAGCGAT CTCGCCGCGG GACAACTATG CGTCAGTGAG AAGAGAGAAC AGAGAGCTGA GACTGGAAGT GGCCAGGATG AGGATGAGGC TAACGGACCT CGAGAAGGAT CATGTTTCGA TGAAGAAAGA CTTCGTGAAG CCGCAGAGCA GGAGGAGGCG TTATGGAATG TTGAGGAAGC TCTCAAGAGG TCTGAACAAG TTGAACGCAA TCGTTTTGAG ATTTAGGAGC AGCCAAAGTA AGCATACGGA GGAGAAAACG AATTCGGAAA GACGATTCAT GTTTCAGAAG AGAAGATGTC ACTCTGTTTC TTGA 
Length1884
Protein Sequence
Protein Residue
Map Locationscaffold_39: 3431.. 5632
Download Sequence
A.thaliana
AGI-codeAT2G47860.3
DescriptionPhototropic-responsive NPH3 family protein
TAIR curator summary
Alias[SETH6]
Gene coexpression
MR
MR Locus Description
1 Ahg483974 Phototropic-responsive NPH3 family protein
56.1249 Ahg472970 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
75.9078 Virus1900
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression