Detail



ID : Ahg497185

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|497185|fgenesh2_kg.39__5__AT2G47940.1
Sequence
TCTCTCTCGC CGGCCGATAT GGCCGTCTCC GTAGCAAACT GCAGCTTCTC CGTCCTCAAT GCCTCCGTTA AACTTCAATC TTCATGCGTC TCCTCACCGT GGTGTTTCGT AGCCGCATCT CAGAAGAAGT CGTTGAATCT TAAGAGGAAA TCGTCGAGGT CTGATTCATC ATCTCCTATA TTAAACCCAG AGAAGAATTA CCCAGGTAGA GTTCGAGATG ATAGTCCCAA TCCTCCTCAA AAAATGGCTT TCAAGGCCTT TGGGTCACCA AAAAAGGAGA AAAAAGAGCC TCTCTCTGAT TTTAGTCGAG ACCAACAGAC TGATCCTGGC AAGATTCACG ATGCATCTTT TCTCAACGCT GTTTTTCGTA ATGAATTGCT TTCTTCTTCT TCAATTACTC TGCTTGCTTC TTCCTTCTTT GAACTACAAG CAAAGACAAT GGAGCTAGCA CTGGAAGGCA TTGCTTTTAT GATTGGAGAT GGCAAGCTCT TGACTAATGC CCATTGTGTC GAACATGATA CACAGGTTAA AGTTAAGAGA AGGGGAGATG ATCGAAAGTA TGTGGCTAAG GTTTTAGTAA GGGGTGTGGA CTGTGACATA GCTTTGCTTT CCGTAGAAAG CGAGGATTTC TGGAAAGGAG CTGAACCACT GCGGCTGGGC CATTTACCCC GCCTTCAGGA TTCAGTAACT GTCGTGGGAT ATCCTCTTGG AGGAGATACA ATCTCTGTTA CAAAAGGGGT TGTATCACGT ATAGAGGTAA CATCATATGC TCATGGATCA TCTGACTTGC TTGGAATTCA AATCGACGCT GCAATAAATC CAGGGAATAG TGGTGGCCCT GCATTCAACG ACCAGGGGGA ATGTATTGGA GTAGCATTCC AGGTTTACAG ATCCGAAGAA ACTGAAAATA TTGGATATGT AATTCCAACA ACCGTTGTTT CTCACTTTTT GACTGATTAT GAGAGGAACG GAAAGTACAC TGGTTACCCT TGCCTTGGAG TGTTGCTGCA GAAATTAGAA AATCCAGCTC TGCGGGAGTG CCTCAAAGTT CCTACAAATG AGGGGGTACT GGTGCGAAGA GTTGAACCTA CATCTGATGC AAGTAAAGTC CTGAAAGAGG GAGATGTGAT TGTAAGTTTT GATGATCTAC ATGTGGGATG TGAAGGAACT GTACCCTTCC GATCCAGTGA ACGCATTGCA TTCCGTTATC TCATCAGTCA AAAATTTGCA GGTGATATCG CTGAGCTTGG TATCATTAGA GCAGGAGAAC ATAAGAAAGT TCAAGTAGTT CTAAGACCAC GAGTGCACCT GGTACCGTAT CATATTGATG GAGGTCAACC ATCATACATT ATTGTTGCTG GTTTGGTGTT TACTCCGCTC TCAGAACCCC TGATAGAGGA GGAGTGTGAG GATACCATAG GCTTGAAATT GTTAACAAAG GCACGCTACT CTGTGGCAAG GTTCAGAGGA GAACAAATCG TCATCCTATC ACAGGTCTTG GCAAATGAAG TAAACATCGG CTATGAGGAC ATGAATAACC AACAGGTCCT GAAGTTCAAT GGAATTCCTA TAAGAAACAT CCATCACTTG GCACATCTCA TTGACATGTG CAAAGATAAG TATCTCGTTT TTGAGTTTGA AGACAACTAT GTTGCTGTGT TGGAGAGAGA AGCTTCAAAT TCTGCTTCCT TGTGCATCCT CAAAGATTAT GGAATTCCCT CGGAAAGATC TGCTGATCTG CTCGAGCCAT ATGTAGATCC AATAGATGAC ACCCAAGCGC TTGACCAAGG TATTGGAGAC AGCCCTGTGT CAAATCTGGA AATCGGCTTT GATGGACTGG TGTGGGCATA AATGTTCAAA AAAGGCGTCC GCAGATGGAA GCCACAGAAA GCTCATACAG CTTCCCCGAA TTTATGGGAA AGCTTTCAGC TTTATCCTCA TTCAGAAGGT CTTGAGCTGC TCCAAGTTTA GTGAATTCTT TCTTCAAAAC CTCTAGGGAT TGAGTTTAAT AGAAAGTTTG CCATGAGAAT GCTTGACCAT TGTGTGCAGA TGAATGTACT GCTAAAAGCA TTGCCAGAAT CTTGACAAAA AGTCAACAAA TTATGCAATG TCTGATTATT TATGAGAAAT GAAATCCAGC AATGTCTTCT GTAACAGAAA TATATATATA TATATATATA TA 
Length2182
Protein Sequence
Protein Residue
Map Locationscaffold_39: 42903.. 47211
Download Sequence
A.thaliana
AGI-codeAT2G47940.1
DescriptionDEGP protease 2
TAIR curator summaryEncodes DegP2 protease (DEGP2); nuclear gene for chloroplast product.
Alias[DEG2][DEGP2][EMB3117][degradation of periplasmic proteins 2][DEGP protease 2][EMBRYO DEFECTIVE 3117]
Gene coexpression
MR
MR Locus Description
8.83176 Ahg351825 Protein of unknown function (DUF1685)
19.4422 Ahg947060
20.7123 Ahg937398
44.5982 Ahg941972 transposable element gene
50.0799 Ahg942384
51.2348 Ahg929976
54.4059 Ahg926347
58.3438 Ahg922509
61.3677 Ahg887863
69.282 Virus2403
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression