| Annotation |
|---|
| Description | jgi|Araly1|497319|fgenesh2_kg.213__2__AT3G62390.1 |
| Sequence |
TAACAGTTAC AGAGAAAAAA AGATGGAGAG ACAAAGGAGC ATCTCTGTGA AGTCCACGAG AGTCTTAGCA TTCATCATCA CAACAATCTC TTCCGCCATT GTTTTCTTCA CTTTCTTCTC CTCTTCCTTA ATCAAATCTA ACTCTTCTCT TTACCCAACA CCAGACTCTA ACTTCCAGAT CGATTTAAGT CCTATAGCCG CCATTTCCGA TTCTTCAGTT TCTCCTCAAG CAAGCCCGGT TCCGATCTCT ACCCATTTCA ATTCGCCCGA AAACACTTCC GGGTCTTCAA AAATTTCAGT TTTTGAGCAG AAGATTCGCG GCGAGAGTTT GGTTAAGGAA GTTAGGGAAA TTGCTAATTT AACTTCGATT AAAGTGGTTG AACTTTCGAG CAACAATGGT GAGGAGAAGA CAAAGAAGAG AATCGAAGAG TGTGATGTTA CGAAAGGGAA GTGGGTTTAC GATAGCGACT ATCCATTGTA CACAAATGCG TCTTGTCCTT TTATCGATGA AGGATTTAGT TGTCAAAGCA ATGGACGATT GAATCTTAAT TACATGAATT GGAGATGGGA GCCTCAAGAT TGTGATGCTC CCAGGTTCAA TGCTACAAAA ATGCTGGAAA TGATAAGAGG GAAGAGGCTA GTGTTCGTTG GAGATTCAAT TAATAGGAAC CAGTGGGAAT CTATGCTTTG TTTGTTGTTT CAAGCTGTTA AAGATCCCAA GAGAGTCTAC GAAATCCACA ACCGAAGAAT CACAAAAGAG AAAGGGAATT ACAGCTTCCG TTTCGTGGAT TATAAATGCA CTGTGGAATT CTATGTTACT CATTTCTTGG TTCGTGAGGG TAGAGCAAGA ATAGGAAAGA AGAGAAGAGA AACACTTAGA ATCGATGCTA TGGATCGAAC CTCTTCGAGA TGGAAAGGTG CTAATATCTT AGTGTTCAAT ACAGCTCATT GGTGGTCTCA TTACAAAACC AAATCGGGGG TCAACTATTA CCAAGAAGGA GACCAGATTC ATCCCAAGCT CGATGTATCA ACCGCTTTCA AGAAAGCTTT GCAGACTTGG TCATCATGGG TTGACAAAAA TGTCGACCCG AAGAAAACTC GCGTTTTCTT TAGAAGCGCT GCACCTTCTC ATTTCAGTGG AGGAGAATGG AACTCAGGAG GTCACTGCAG AGAAGCCAAC ATGCCGTTGA ACCAAACCTT CAAACCGAGT TACTCGAGCA AAAAGTCCAT TGTTGAGGAA GTACTGAAGC AGATGAGAAC ACCGGTAACC CTCTTGAACG TTAGCGGTTT ATCTCAGTAC AGAATTGACG CCCACCCGTC TATTTACGGA ACAAAACCCG AAAACCGGCG TTCAAAAGCT GTCCAAGATT GCAGTCATTG GTGTCTCCCT GGTGTTCCTG ATACATGGAA CCACTTCCTT TACCTCCATT TGCTCCATAA ACGATAAATA GAGTTAACAA ACTAATCATA GCTCCAGTTA CTTGTTCAGA ATTGTTTGTT TAATGTAGGG ATGGTCGATC CAGTTTAACC AACCAAACCA AAACCATATT GGAAAAACCA CTATGACAAC TGAAATGAAA AGACAAAAAA AAAAGAAAAA AGTTTTAGTT TTCCTCTGAC TCACGCTGGT CCCATGAATG TCAATCTCTT GGTTAATTG |
| Length | 1659 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_213: 5004.. 7126 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G62390.1 |
| Description | TRICHOME BIREFRINGENCE-LIKE 6 |
| TAIR curator summary | Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). |
| Alias | [TBL6][TRICHOME BIREFRINGENCE-LIKE 6] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 14.8661 |
Ahg494310 | beta HLH protein 71 |
| 22.1359 |
Ahg490341 | glycosyl hydrolase 9B13 |
| 28.3549 |
Ahg492374 | tryptophan aminotransferase related 2 |
| 36.1663 |
Ahg317406 | Actin-binding FH2 (formin homology 2) family protein |
| 44.0454 |
Ahg476498 | Pathogenesis-related thaumatin superfamily protein |
| 47.3709 |
Ahg927211 | Glycosyl hydrolase family protein |
| 54.2679 |
Ahg326319 | NAD(P)-binding Rossmann-fold superfamily protein |
| 57.0263 |
Ahg495659 | FASCICLIN-like arabinogalactan 1 |
| 59.8916 |
Ahg330654 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
| 60.0999 |
Ahg920334 | homeobox protein 31 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|