Detail



ID : Ahg497322

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|497322|fgenesh2_kg.222__1__AT3G11650.1
Sequence
AATTTCTCTC TGAGGCAAAT CGTCGAACAC ATGGGGACCA AACAACCATA CCTAAACGGC GCATACTACG GACCATCAAT TCCTCCGCCG GCTAAAGCTC ACCGCAGCTA CGACTCACCT GGATTCGGAT GCTGTTGCTT CAGCTGCCTC GGAAGCTGTC TACGCTGCTG CGGTTGCTGC ATCTTAAGCC TGATCTGCAA CATCCTCATA GCCATAGCCG TAATCCTCGC AATCACCGGT TTTATCCTCT GGCTCATATT CCGTCCAAAC GCCGTCAAAT TCTACGTCGC CGACGCTAAT CTGAACCGAT TCAGCTTCGA TTCAAACAAC AACAGCAATC TCCATTACAG TCTCGATCTC AATTTCACAA TCCGTAACCC TAATCAACGA GTCGGAGTCT ACTACGATGA GATCTCGGTG AGTGGCTATT ACGGTGATCA GAGATTCGGA TCTGTGAACG TTTCGTCGTT TTATCAAGGG CACAAGAATA CGACGGTGAT TTTAAGAAAA ATTGAAGGAC AGAATCTGGT GGTGCTCGGC GACGGAGCGA GAACAGATCT GAAGGAAGAT GAGAAATCTG GGGTTTATCG GATTGATGCG AAATTGCGGC TAAGTGTTAG GTTTAAGTTT TGGGTGATTA AGTCGTGGAA GCTTAAACCA AAGATTAAGT GTGATGATCT TAAGATTCCT CTTGGTTCCT CTAATTCAAC CGGAGGGTTT AAGTTTCAAC CAGTCAAGTG TGATTTTGAC TTATCTTAGT CAACTCCAAG TTTTATGAAT TTTTTTTT 
Length788
Protein Sequence
Protein Residue
Map Locationscaffold_222: 1746.. 2520
Download Sequence
A.thaliana
AGI-codeAT3G11650.1
DescriptionNDR1/HIN1-like 2
TAIR curator summaryEncodes a protein whose sequence is similar to tobacco hairpin-induced gene (HIN1) and Arabidopsis non-race specific disease resistance gene (NDR1). Expression of this gene is induced by cucumber mosaic virus and spermine. Overexpression of the gene induces the expression of PR-1 gene and shows light-dependent 'speck disease-like' symptom on leaves. The gene product is localized to the chloroplast
Alias[NHL2][NDR1/HIN1-like 2]
Gene coexpression
MR
MR Locus Description
1 Ahg478510 NDR1/HIN1-like 2
10.8167 Ahg488592
16.9706 Ahg908965 nudix hydrolase homolog 21
17.6068 Ahg936606 galacturonosyltransferase-like 10
21.9089 Ahg312784 nudix hydrolase homolog 4
28 Ahg482846 prenylated RAB acceptor 1.B4
29.6985 Ahg476631 Integrase-type DNA-binding superfamily protein
34.5543 Ahg945643 dicarboxylate carrier 2
42.4971 Ahg476579 Protein of unknown function (DUF793)
46.2169 Ahg944463 redox responsive transcription factor 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression